ViewGene
Locus Name:
GeneID:
Location:

GeneID:6999
TrivialName: PA14_00520
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_00520
PAO1 Ortholog Locus:
Sequence Length:123
Protein Length:40
Start: 54577
Stop: 54699
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAD16673.1| (AL646072) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Identities = 20/39 (51%), Positives = 24/39 (61%)
Sequence:
ATGGTCCAGCGGGGACACAATCGGCAAGTGGTATTCGCCGAGGACGAGGACTACCAGCGTTACCTCTCCGAT
CTACGGGACCTCGAGGATGCCTTCGATAACAAGCTCCATGCATTTTGCTGA
Translation:
MVQRGHNRQVVFAEDEDYQRYLSDLRDLEDAFDNKLHAFC*
AnnotationID:7000GeneID:6999
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 15:03:29
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13678




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31073




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 50001How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5855914Stop: 5856036

          
Length: 123


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGTCCAGCGGGGACACAATCGGCAAGTGGTATTCGCCGAGGACGAGGACTACCAGCGTTACCTCTCCGAT 
CTACGGGACCTCGAGGATGCCTTCGATAACAAGCTCCATGCATTTTGCTGA