ViewGene

Locus Name:
GeneID:
Location:

GeneID:6994
TrivialName: PA14_00370
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_00370
PAO1 Ortholog Locus:
Sequence Length:1740
Protein Length:579
Start: 32868
Stop: 34607
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCGTTGGTCACCGCGATATCGCTCCAGCCTGGATCGGCCAGCCTGACGCGGGCACAGGCGGGGTCTTCG
GCGTATAGCGAGGCGCTGCCCAGGAACAGGGTGGCGGCCAGCAGGCAGGTGGGAAGCCGGTTCATGGAAGTG
CCCTCGTGCTCAGGGTTGCGGGAAGCGCGCGCGGCGCTCGAGATCGTCCAGGTCGATATGGTTGCGCATGTA
CTGCTGGCTGGCGTCGATCCACGGCTGGTGGTCCCAACTGGCCAGCCGCCCTCGCGCCAGCGCGGCGGCCAC
CAGGCGTCGGCGGCGCTGGCTGTCGAGTACGGCGCGGGTGATCGCGGGGATGTCCCAGCGTCGCCGGGCCTC
GTCGAGGAACGCCTCGAACGTTCCGCGATGGGCCGGACTGGCGGCGAGGTTCTCGCGCTCCTGCGGGTCGTT
GCGCAGGTCGTAGAGCAGGCAGGGGTCCTGCTCGGAGTAGATGAACTTGTAGTCGCCGCGGCGGATCATCAT
CAGCGGGCTGAGGGTGCCCTCGGCGGTGTATTCGCCGATCACCTCGTCATGCCCGCTGCCGTCGCGCAGGTG
CGGCAGCAGCGAGCGGCCTTCCAGCGGCAGGCGTGGATCGACCTGGCCGCCGGCCAGCTCCACCAGGGTCGG
CAGCAGGTCCACGGTGGATACCGAAGCGCCGATGCGGCGCGGCGCGAAGCGCGCCGGCGCATGGACCAGCAG
CGGCACGCGCGCGGCCATCTCGAACCAGTGCATCTTGTACCAGAGGCCGCGCTCGCCGAGCATGTCGCCATG
GTCGCCGGAGAACACCACGATGGTGTCGTCGGCCAGCCCGCATTCCTCCAGGGTCGCCAGCAGCGCACCGAT
CTGCGCGTCGACGTAGCTGCAGGCGCCGAAGTAGGCACGCCGGGCGGCGCGGATGCGCTCCTCGGGCAACGG
CTTGTCCCACAGGTCGATGACCTTCAGCAGGCGTTGCGAATGAGGGTCCTGCTCCTCCTGGGCGAAGCGCTG
GCGCGGCAGCGGGATGTCCTCGTCGCGGTAGAGATTCCAGTAGCTCGCCGGGATGCTGTAGGGGTCGTGCGG
ATGGGTCATCGACACGGTCAGGCAGAATGGCTGGCCGGCGTGCTGGCGAACATGGTCGTAGAGGTACTGGCG
GGCCTTGAACACCACCTCCTCGTCGAAGTCCAGCTGGTTGGTGCGCACGCAGGGACCGGCCTGCAAAACCGA
GGACATGTTGTGGTACCAGCTCGGGCGCACCTCCGGCTCGTCCCAGTTCACCGCCCAGCCATAGTCCGCCGG
ATAGATGTCGCTGGTCAGGCGTTCCTCGTAGCCGTGCAACTGGTCGGGACCGCAGAAGTGCATCTTGCCCGA
CAGCGCCGTGCGATAGCCGAGGTTGCGCAGGTAGTGGGCGTAGGTGGGGGTATCGGCGGCGAAGTCGGCGGC
GTTGTCCCAGGCGCCGATGCGAGTAGGCAAGCGACCGCTGACCAGGGTGAAGCGCGACGGCGCGCAGAGCGG
GCTGTTGCAGTACGCCGAGTCGAACACCACGGCCCGTTCGGCGAGGCGCGAGAGGTGAGGCATGCGCAGCAC
CGAGCGCGGATCGTGAAGCGGCAGCAGCGGCGCGGCCATCTGGTCGGCCATGATGAACAGGATGTTCGGCGA
GGTCTTCATCGGGCGGCTTATCCCATGCGATTGGGTTATGCGATAGTGCTGCGTCGATCATCAGTGCATCGA
AATCCCTGGTAA
Translation:
MALVTAISLQPGSASLTRAQAGSSAYSEALPRNRVAASRQVGSRFMEVPSCSGLREARAALEIVQVDMVAHV
LLAGVDPRLVVPTGQPPSRQRGGHQASAALAVEYGAGDRGDVPASPGLVEERLERSAMGRTGGEVLALLRVV
AQVVEQAGVLLGVDELVVAAADHHQRAEGALGGVFADHLVMPAAVAQVRQQRAAFQRQAWIDLAAGQLHQGR
QQVHGGYRSADAARREARRRMDQQRHARGHLEPVHLVPEAALAEHVAMVAGEHHDGVVGQPAFLQGRQQRTD
LRVDVAAGAEVGTPGGADALLGQRLVPQVDDLQQALRMRVLLLLGEALARQRDVLVAVEIPVARRDAVGVVR
MGHRHGQAEWLAGVLANMVVEVLAGLEHHLLVEVQLVGAHAGTGLQNRGHVVVPARAHLRLVPVHRPAIVRR
IDVAGQAFLVAVQLVGTAEVHLARQRRAIAEVAQVVGVGGGIGGEVGGVVPGADASRQATADQGEARRRAER
AVAVRRVEHHGPFGEAREVRHAQHRARIVKRQQRRGHLVGHDEQDVRRGLHRAAYPMRLGYAIVLRRSSVHR
NPW*
AnnotationID:6995GeneID:6994
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 13:01:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.

Genomic Context:
Comment:
ReferenceID:16722
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31063
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49996How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5834205Stop: 5835944
Length: 1740
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCGTTGGTCACCGCGATATCGCTCCAGCCTGGATCGGCCAGCCTGACGCGGGCACAGGCGGGGTCTTCG
GCGTATAGCGAGGCGCTGCCCAGGAACAGGGTGGCGGCCAGCAGGCAGGTGGGAAGCCGGTTCATGGAAGTG
CCCTCGTGCTCAGGGTTGCGGGAAGCGCGCGCGGCGCTCGAGATCGTCCAGGTCGATATGGTTGCGCATGTA
CTGCTGGCTGGCGTCGATCCACGGCTGGTGGTCCCAACTGGCCAGCCGCCCTCGCGCCAGCGCGGCGGCCAC
CAGGCGTCGGCGGCGCTGGCTGTCGAGTACGGCGCGGGTGATCGCGGGGATGTCCCAGCGTCGCCGGGCCTC
GTCGAGGAACGCCTCGAACGTTCCGCGATGGGCCGGACTGGCGGCGAGGTTCTCGCGCTCCTGCGGGTCGTT
GCGCAGGTCGTAGAGCAGGCAGGGGTCCTGCTCGGAGTAGATGAACTTGTAGTCGCCGCGGCGGATCATCAT
CAGCGGGCTGAGGGTGCCCTCGGCGGTGTATTCGCCGATCACCTCGTCATGCCCGCTGCCGTCGCGCAGGTG
CGGCAGCAGCGAGCGGCCTTCCAGCGGCAGGCGTGGATCGACCTGGCCGCCGGCCAGCTCCACCAGGGTCGG
CAGCAGGTCCACGGTGGATACCGAAGCGCCGATGCGGCGCGGCGCGAAGCGCGCCGGCGCATGGACCAGCAG
CGGCACGCGCGCGGCCATCTCGAACCAGTGCATCTTGTACCAGAGGCCGCGCTCGCCGAGCATGTCGCCATG
GTCGCCGGAGAACACCACGATGGTGTCGTCGGCCAGCCCGCATTCCTCCAGGGTCGCCAGCAGCGCACCGAT
CTGCGCGTCGACGTAGCTGCAGGCGCCGAAGTAGGCACGCCGGGCGGCGCGGATGCGCTCCTCGGGCAACGG
CTTGTCCCACAGGTCGATGACCTTCAGCAGGCGTTGCGAATGAGGGTCCTGCTCCTCCTGGGCGAAGCGCTG
GCGCGGCAGCGGGATGTCCTCGTCGCGGTAGAGATTCCAGTAGCTCGCCGGGATGCTGTAGGGGTCGTGCGG
ATGGGTCATCGACACGGTCAGGCAGAATGGCTGGCCGGCGTGCTGGCGAACATGGTCGTAGAGGTACTGGCG
GGCCTTGAACACCACCTCCTCGTCGAAGTCCAGCTGGTTGGTGCGCACGCAGGGACCGGCCTGCAAAACCGA
GGACATGTTGTGGTACCAGCTCGGGCGCACCTCCGGCTCGTCCCAGTTCACCGCCCAGCCATAGTCCGCCGG
ATAGATGTCGCTGGTCAGGCGTTCCTCGTAGCCGTGCAACTGGTCGGGACCGCAGAAGTGCATCTTGCCCGA
CAGCGCCGTGCGATAGCCGAGGTTGCGCAGGTAGTGGGCGTAGGTGGGGGTATCGGCGGCGAAGTCGGCGGC
GTTGTCCCAGGCGCCGATGCGAGTAGGCAAGCGACCGCTGACCAGGGTGAAGCGCGACGGCGCGCAGAGCGG
GCTGTTGCAGTACGCCGAGTCGAACACCACGGCCCGTTCGGCGAGGCGCGAGAGGTGAGGCATGCGCAGCAC
CGAGCGCGGATCGTGAAGCGGCAGCAGCGGCGCGGCCATCTGGTCGGCCATGATGAACAGGATGTTCGGCGA
GGTCTTCATCGGGCGGCTTATCCCATGCGATTGGGTTATGCGATAGTGCTGCGTCGATCATCAGTGCATCGA
AATCCCTGGTAA