ViewGene
Locus Name:
GeneID:
Location:

GeneID:6993
TrivialName: PA14_00350
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_00350
PAO1 Ortholog Locus:
Sequence Length:873
Protein Length:290
Start: 32075
Stop: 32947
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCGCTATGGCTGGCCGCGAACCGCGGCCAGGGCGTCGCCGCCGTCGCGGCTGGTCACCCCTTGcagCca
GGCCTCGAGCACCCGCGGGTTGGCCTTGAGCCAGGCGCGGGTCGCCGAGGCCGGAGTCGCCGTGCCTTCCAG
CGCGTCGCTCATCAGGCGGTTCTCCATGTCCAGGTCGAAGCGCAGGTTGGCCAGCAGCCGCGCCGGGTTCGG
GCACTGCGCGGCGTAGCCCTTGCGTGCCAGGGTATAGACCTGGCCGCGGTCGCCGAAGTACTGCTCGCCGCC
TTCCAGGTAGCGCAGGTCATGGCGGATGTTCATCGGGTGCGGCGTCCAGCCGAGGAACACCAGCCAGCGCTG
GCGCTTCTCGGCCCGGCCGAGTTCGGCGAGCATCGCCTGCTCGCTGGACTCCACCAGCTTCCAGTCGCCGAG
GCCGAACTGGTTGGCGTCGATCATCTTCTGGATCGACTGATTGGCCGGCGCGCCGGAGCCGATCCCGTACAG
CTTGCGGTTGAAGCGTTGCCCTTGCGCGGCGAGGTCTTCGAAGCGGTGTACGCCGGCGTCCCAGACGTAGCG
CGGCACCGCCAGGGTGAAGCGGGTGCCATCGAGGTTGCGAGCGAGGCGTTCGACCTGGCCGCTGGCGACGAA
CTTGTCGTGATAGTCCTGGTGCGCGGGCATCCAGCCGCCGAGGAAGGCGTCCACCTGGCCGTCGCGCAGGCC
GCCATAGATGATCGGCACCGACAGGGTATCGATCTTCACCTGGTAGCCGAGGCTTTCCAGGAGAAACGCGGC
GGTGGCGTTGGTCACCGCGATATCGCTCCAGCCTGGATCGGCCAGCCTGACGCGGGCACAGGCGGGGTCTTC
GGCGTATAG
Translation:
MALWLAANRGQGVAAVAAGHPLQPGLEHPRVGLEPGAGRRGRSRRAFQRVAHQAVLHVQVEAQVGQQPRRVR
ALRGVALACQGIDLAAVAEVLLAAFQVAQVMADVHRVRRPAEEHQPALALLGPAEFGEHRLLAGLHQLPVAE
AELVGVDHLLDRLIGRRAGADPVQLAVEALPLRGEVFEAVYAGVPDVARHRQGEAGAIEVASEAFDLAAGDE
LVVIVLVRGHPAAEEGVHLAVAQAAIDDRHRQGIDLHLVAEAFQEKRGGGVGHRDIAPAWIGQPDAGTGGVF
GV*
AnnotationID:6994GeneID:6993
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 13:01:17
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13667




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:31061




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49995How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5833412Stop: 5834284

          
Length: 873


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGCGCTATGGCTGGCCGCGAACCGCGGCCAGGGCGTCGCCGCCGTCGCGGCTGGTCACCCCTTGcagCca 
GGCCTCGAGCACCCGCGGGTTGGCCTTGAGCCAGGCGCGGGTCGCCGAGGCCGGAGTCGCCGTGCCTTCCAG 
CGCGTCGCTCATCAGGCGGTTCTCCATGTCCAGGTCGAAGCGCAGGTTGGCCAGCAGCCGCGCCGGGTTCGG 
GCACTGCGCGGCGTAGCCCTTGCGTGCCAGGGTATAGACCTGGCCGCGGTCGCCGAAGTACTGCTCGCCGCC 
TTCCAGGTAGCGCAGGTCATGGCGGATGTTCATCGGGTGCGGCGTCCAGCCGAGGAACACCAGCCAGCGCTG 
GCGCTTCTCGGCCCGGCCGAGTTCGGCGAGCATCGCCTGCTCGCTGGACTCCACCAGCTTCCAGTCGCCGAG 
GCCGAACTGGTTGGCGTCGATCATCTTCTGGATCGACTGATTGGCCGGCGCGCCGGAGCCGATCCCGTACAG 
CTTGCGGTTGAAGCGTTGCCCTTGCGCGGCGAGGTCTTCGAAGCGGTGTACGCCGGCGTCCCAGACGTAGCG 
CGGCACCGCCAGGGTGAAGCGGGTGCCATCGAGGTTGCGAGCGAGGCGTTCGACCTGGCCGCTGGCGACGAA 
CTTGTCGTGATAGTCCTGGTGCGCGGGCATCCAGCCGCCGAGGAAGGCGTCCACCTGGCCGTCGCGCAGGCC 
GCCATAGATGATCGGCACCGACAGGGTATCGATCTTCACCTGGTAGCCGAGGCTTTCCAGGAGAAACGCGGC 
GGTGGCGTTGGTCACCGCGATATCGCTCCAGCCTGGATCGGCCAGCCTGACGCGGGCACAGGCGGGGTCTTC 
GGCGTATAG