ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6989

TrivialName: PA14_00220

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_00220

PAO1 Ortholog Locus:

Sequence Length: 1275

Protein Length: 424

Start: 23969

Stop: 22695

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD16285.1| (AL646070) PUTATIVE CONJUGAL TRANSFER TRBL TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] Identities = 59/189 (31%), Positives = 71/189 (37%), Gaps = 31/189 (16%)

Sequence:

ATGCACCCAGGTGCCGGCCTCGCAGGCGACCCGGCCGTCGAGTTCCAGTTCGCTGAGCGTCGCCAGCACGTC
GGGCAGCGTCATGCCGCTGGCGGCGGCCAGGCCTTCGCTGGTGTAGGGCGCGGCGCGCAGCAGCGCCAGCAA
AGGGTGGGGCAGGGGTTGCGCCGGCGCTTCCGCTGGCTCCGCCTGCGCCCAGCCGCGCAGTGCTTCGAGCAC
GTGCCCGACGCTTTCCACCAGCAGCGCGCCATCGCGAATCAGCTGGTGGCAGCCACGTGCGCCGGGGTGGTG
GATGGAGCCCGGGATGGCGTATACCTCGCGACCCTGTTCCGCCGCCAGCCGCGCGGTGATCAGCGAGCCGCT
GGCGGGACTTGCCTCGACCACCAGCACACCCAGCGAGAGTCCGCTGATGATGCGGTTGCGCCGGGGAAAGTT
TGCCGGCAGCGGCGGGCTGTCCAGCGGCAGTTCCGAAACCAGCGCGCCGCCACCCTCGACGATGCGCCGCGC
CAGCGCCTCGTGGCGGCGCGGATAGAGCCTGCGCAGGCCGGTGCCGAGGACTGCCACGGTCACGCCGCCAAC
CTCCAGCGCGCCCTCGTGGGCGGCGCCATCGATGCCCAGGGCCAGCCCGCTGGTGATGGCGAAGCCGCCCTG
CGCCAGGCTGCGCGCAAAGCTCCGGGCGGTGCCCAGCCCGGCGGGGCTGGCGCGGCGGCTGCCGACCATCGC
CAGTTGCGGCCGTTCCAGAGTCTCCGGAGCGCCTTCGACGTACAGCAGCGGCGGGGCATCGGCGACTTCGGC
GAGCAGTGCCGGGTATCCCGGGTCGTCCCACATCAGCAGGTGCCTGCGCGGACCTTCCAGCCAGCGCAGGGC
TTCACCCGCCGCTTCCCGCACCGCCGGGCTGCGCCGCGCGGCAGCGGCCTCGGCAGGCACTCCCAGGGTGCG
CCAGGCGCCGGCTGGCGCGGCAAGCGCGGAAGAGGCCGAACCGAAGGCCTCGATCAAGCGCAGGAAGCGCAT
GGGCCCCAGTTCGGGCAGGCCATGCAGGCGCAGCCGTGCTTCCAGTTCGGCTGGAGAATGGTTCTTCATCGC
GACTCATCCATAGCAGGCAGGTCCATCGCTGACAGGAAGAGGGGAAGGGTCCGGCTTCCATCCTGGAAACCG
TCGTATGAAATTTCCTTCCCCCAGAAACGCGAAACCCCCGCCGAGGCGGGGGTTTCGAGTCAGGGATTCTGC
ACCCTGTCGGTTACCGAGAGCGGCCTGCTGGCCATCAGAACCAGGGCGTAG

Translation:

MHPGAGLAGDPAVEFQFAERRQHVGQRHAAGGGQAFAGVGRGAQQRQQRVGQGLRRRFRWLRLRPAAQCFEH
VPDAFHQQRAIANQLVAATCAGVVDGARDGVYLATLFRRQPRGDQRAAGGTCLDHQHTQRESADDAVAPGKV
CRQRRAVQRQFRNQRAATLDDAPRQRLVAARIEPAQAGAEDCHGHAANLQRALVGGAIDAQGQPAGDGEAAL
RQAARKAPGGAQPGGAGAAAADHRQLRPFQSLRSAFDVQQRRGIGDFGEQCRVSRVVPHQQVPARTFQPAQG
FTRRFPHRRAAPRGSGLGRHSQGAPGAGWRGKRGRGRTEGLDQAQEAHGPQFGQAMQAQPCFQFGWRMVLHR
DSSIAGRSIADRKRGRVRLPSWKPSYEISFPQKRETPAEAGVSSQGFCTLSVTESGLLAIRTRA*

AnnotationID:6990 GeneID:6989

AnnotatorUID: diggins

Modification Date/Time: 2005-03-22 11:11:46

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13661

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31053