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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06972.1|AE004779_4 (AE004779) glycerol-3-phosphate dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 511/512 (99%), Positives = 511/512 (99%)
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Sequence:
ATGAGTCAAGCGCACACCCCCTCCGCTCCACTCGCCGAAGTCTACGATGTCGCCGTGGTCGGCGGTGGCATC
AACGGTGTAGGGATCGCCGCCGACGCAGCCGGGCGCGGCCTGTCCGTGTTCCTTTGCGAACAGCACGACCTG
GCCCAGCACACCTCCTCGGCCAGCAGCAAGCTGATCCACGGCGGCCTGCGCTACCTCGAACACTACGAATTC
CGCCTGGTCCGCGAAGCCCTGGCCGAGCGCGAGGTCCTGCTGGCCAAGGCGCCGCACATCGTCAAGCCGCTG
CGCTTCGTCCTGCCGCACCGTCCGCACCTGCGCCCGGCCTGGATGATCCGCGCCGGCCTGTTCCTCTACGAT
CACCTCGGCAAGCGCGAGAAGCTGCCCGCCTCGCGCGGCCTGCGCTTCACCGGCAGCAGCCCGCTGAAGGCC
GAGATCCGCCGTGGCTTCGAGTACTCCGACTGCGCGGTGGACGATGCGCGCCTGGTGGTGCTCAACGCAATC
TCCGCCCGCGAGCACGGCGCCCACGTCCATACCCGCACCCGCTGCGTCAGCGCCCGTCGCAGCAAGGGACTC
TGGCACCTGCACCTGGAGCGCAGCGACGGTAGCCTGTATTCGATCCGCGCCCGCGCCCTGGTGAACGCCGCC
GGCCCCTGGGTGGCGCGCTTCATCCAGGACGACCTGAAACAGAAGTCGCCCTACGGTATCCGCCTGATCCAG
GGCAGCCACATCATCGTGCCGAAGCTGTACGAAGGCGAGCACGCCTACATCCTGCAGAACGAAGACCGCCGC
ATCGTCTTCGCCATCCCCTATCTGGACCGCTTCACCATGATCGGCACCACCGATCGCGAGTACCAGGGCGAC
CCGGCCAAGGTGGCGATCAGCGAAGAGGAAACCGCCTACCTGCTGCAAGTGGTGAACGCCCATTTCAAGCAG
CAGCTTGCGGCCGCCGACATCCTGCACAGCTTCGCCGGCGTGCGTCCGCTGTGCGACGACGAGTCCGACGAG
CCTTCGGCGATCACCCGCGACTACACCCTGTCGCTCTCCGCCGGCAACGGCGAGCCGCCGCTGCTCTCGGTG
TTCGGCGGCAAGCTGACCACCTACCGCAAGCTGGCCGAATCGGCGCTGGCGCAGCTCCAGCCGTTCTTCGCC
AATCTCGGCCCGGCCTGGACCGCCAAGGCACCGCTGCCGGGCGGCGAGCAGATGCAGAGCGTCGAGGCGCTC
ACCGAGCAACTGGCCAACCGCTACGCCTGGCTCGACCGCGAACTGGCGCTGCGCTGGGCGCGCACCTACGGC
ACCCGGGTGTGGCGCCTGCTGGACGGGGTCAATGGCGAAGCCGATCTCGGCGAGCACCTGGGCGGCGGCCTG
TATGCCCGCGAAGTGGACTACCTGTGCAAGCACGAGTGGGCCCAGGACGCCGAGGACATCCTCTGGCGCCGC
AGCAAGCTCGGCCTGTTCCTCTCGCCGAGCCAGCAGGTGCGCCTCGGCCAGTACCTGCAGAGCGAGCATCCG
CATCGCCCGCGGGTGCATGCGGCCTGA |
Translation:
MSQAHTPSAPLAEVYDVAVVGGGINGVGIAADAAGRGLSVFLCEQHDLAQHTSSASSKLIHGGLRYLEHYEF
RLVREALAEREVLLAKAPHIVKPLRFVLPHRPHLRPAWMIRAGLFLYDHLGKREKLPASRGLRFTGSSPLKA
EIRRGFEYSDCAVDDARLVVLNAISAREHGAHVHTRTRCVSARRSKGLWHLHLERSDGSLYSIRARALVNAA
GPWVARFIQDDLKQKSPYGIRLIQGSHIIVPKLYEGEHAYILQNEDRRIVFAIPYLDRFTMIGTTDREYQGD
PAKVAISEEETAYLLQVVNAHFKQQLAAADILHSFAGVRPLCDDESDEPSAITRDYTLSLSAGNGEPPLLSV
FGGKLTTYRKLAESALAQLQPFFANLGPAWTAKAPLPGGEQMQSVEALTEQLANRYAWLDRELALRWARTYG
TRVWRLLDGVNGEADLGEHLGGGLYAREVDYLCKHEWAQDAEDILWRRSKLGLFLSPSQQVRLGQYLQSEHP
HRPRVHAA* |
AnnotationID:705 | GeneID:696 |
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Modification Date/Time: |
2005-04-20 09:09:41 |
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GeneProduct: | glycerol-3-phosphate dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | sn-glycerol-3-phosphate dehydrogenase (aerobic) |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO57626.1| (AE016871) glycerol-3-phosphate dehydrogenase [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 512
Score = 778 bits (2008), Expect = 0.0
Identities = 372/512 (72%), Positives = 432/512 (84%)
>gb|AAC76451.1| (AE000418) sn-glycerol-3-phosphate dehydrogenase (aerobic)
[Escherichia coli K12]
Length = 501
Score = 585 bits (1508), Expect = e-166
Identities = 298/488 (61%), Positives = 351/488 (71%), Gaps = 1/488 (0%)
>gb|AAO71457.1| (AE016847) aerobic glycerol-3-phosphate dehydrogenase [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
Length = 502
Score = 569 bits (1467), Expect = e-161
Identities = 290/488 (59%), Positives = 346/488 (70%), Gaps = 1/488 (0%) |
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Structural Features: | COG0578, GlpA, Glycerol-3-phosphate dehydrogenase
[Energy production and conversion]
CD-Length = 532 residues, 97.0% aligned
Score = 562 bits (1450), Expect = 7e-161
Identities = 256/519 (49%), Positives = 309/519 (59%), Gaps = 17/519 (3%)
KOG0042, Glycerol-3-phosphate dehydrogenase
[Energy production and conversion]
CD-Length = 680 residues, 72.1% aligned
Score = 213 bits (543), Expect = 1e-55
Identities = 151/507 (29%), Positives = 239/507 (47%), Gaps = 53/507 (10%) |
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ReferenceID:34161 |
Author/Investigator(s): |
Liao X, Charlebois I, Ouellet C, Morency MJ, Dewar K, Lightfoot J, Foster J, Siehnel R, Schweizer H, Lam JS, Hancock RE, Levesque RC. |
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Title: |
Physical mapping of 32 genetic markers on the Pseudomonas aeruginosa PAO1 chromosome. |
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Source: | Microbiology. 1996 Jan;142 ( Pt 1):79-86. |
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