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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05352.1|AE004623_2 (AE004623) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 521/521 (100%), Positives = 521/521 (100%)
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Sequence:
ATGCAGTTCGGCGCCAAGCCGCTGTTCGAGAACGTTTCCGTCAAGTTCGGCAACGGCAACCGCTACGGCCTG
ATCGGCGCCAACGGTTGCGGCAAGTCGACCTTCATGAAGATCCTCGGCAACGACCTGGAGCCGAGCGCCGGC
CAGGTCATGCTGGAACCCAACGTGCGCCTGGGCAAGCTGCGCCAGGACCAGTTCGCCTACGAGGACTTCAGC
GTCATCGATACGGTGATCATGGGCCACGAGGAACTCTGGGCGGTGAAGGCCGAGCGCGACCGCATCTACTCC
CTGCCGGAAATGAGCGAGGCAGATGGCATGGCGGTGGCCGAGCTGGAAGTCCAGTTCGCCGAGTTCGACGGC
TACACCGCCGAGTCCCGCGCCGGCGAGCTGCTGCTCGGCCTGGGCATCCCGCTGGAGCAGCACTTCGGCCCG
ATGAGCGCCGTCGCTCCCGGCTGGAAGCTGCGCGTACTGCTGGCCCAGGCGCTGTTCTCGGACCCGGACGTG
CTGCTGCTCGACGAACCGACCAACCACCTGGACATCAACACCATCCGCTGGCTGGAAGGCGTGCTCACCGCG
CGCAACAGCACCATGATCATCATTTCCCACGATCGGCACTTCCTGAACAGCGTCTGCACCCACATGGCCGAC
CTGGACTACGGCGAGCTGCGCCTGTTCCCGGGCAACTACGACGAGTACATGACCGCCGCCGAACAGGCCCGC
GAGCGCCTGCTGTCGGACAACGCCAAGAAGAAGGCGCAGATCGCCGAGCTGCAATCCTTCGTCAGCCGCTTC
TCGGCCAACGCCTCCAAGGCCAAGCAGGCCACCAGCCGCGCCCGACAGATCGACAAGATCCAGCTGGAAGAG
GTCAAGCCGTCCAGCCGGGTCAGCCCGTTCATCCGCTTCGAGCAATACAAGAAGCTGCACCGCCAGGCGGTG
ACCGTGGAAAACATCAGCAAGGGCTATGACGGCAAGCCGCTGTTCAAGGGCCTGAGCCTGCAGGTCGAGGCC
GGCGAGCGCGTCGCCATCATCGGCCCCAACGGCATCGGCAAGACCACCCTGTTGCGCTGCCTGGTCGGCGAC
CTGCCGGTGGACGGCGGCGAGGTGAAATGGACCGACAGCGCCGACGTCGGCTATTTCGCCCAGGACCATGCC
GACGACTTCGCCGACGACATGAGCCTGTTCGACTGGATGGCCCAGTGGACCCAGGGCGGCGAACAACTGGTG
CGCGGCACCCTCGGCCGCATGCTGTTCTCCAACGACGAGATCAAGAAGTCGGTGAAAGTGATCTCCGGCGGC
GAGCAGGGCCGCATGCTGTTCGGCCGGCTGATCCTCAAGCGTCCCAACGTGCTGGTGATGGACGAGCCGACC
AACCACCTGGACATGGAGTCCATCGAGGCGCTGAACCTGGCGCTGGACAACTATCCGGGCACGCTGATCTTC
GTCAGCCACGACCGCGAATTCGTTTCCTCGCTGGCTACCCGCATCATCGAGCTGGGCGAGAACGGCGTGACC
GACTTCAGCGGCAGCTATGACGACTACCTGCGCAGCCAGGGCGTGATCGTCTGA |
Translation:
MQFGAKPLFENVSVKFGNGNRYGLIGANGCGKSTFMKILGNDLEPSAGQVMLEPNVRLGKLRQDQFAYEDFS
VIDTVIMGHEELWAVKAERDRIYSLPEMSEADGMAVAELEVQFAEFDGYTAESRAGELLLGLGIPLEQHFGP
MSAVAPGWKLRVLLAQALFSDPDVLLLDEPTNHLDINTIRWLEGVLTARNSTMIIISHDRHFLNSVCTHMAD
LDYGELRLFPGNYDEYMTAAEQARERLLSDNAKKKAQIAELQSFVSRFSANASKAKQATSRARQIDKIQLEE
VKPSSRVSPFIRFEQYKKLHRQAVTVENISKGYDGKPLFKGLSLQVEAGERVAIIGPNGIGKTTLLRCLVGD
LPVDGGEVKWTDSADVGYFAQDHADDFADDMSLFDWMAQWTQGGEQLVRGTLGRMLFSNDEIKKSVKVISGG
EQGRMLFGRLILKRPNVLVMDEPTNHLDMESIEALNLALDNYPGTLIFVSHDREFVSSLATRIIELGENGVT
DFSGSYDDYLRSQGVIV* |
AnnotationID:702 | GeneID:693 |
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Modification Date/Time: |
2005-03-02 15:03:01 |
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GeneProduct: | putative ATP-binding component of ABC transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN68544.1|AE016486_7 (AE016785) ABC transporter, ATP-binding protein [Pseudomonas putida
KT2440]
Length = 528
Score = 913 bits (2359), Expect = 0.0
Identities = 455/521 (87%), Positives = 485/521 (93%), Gaps = 1/521 (0%)
>gb|AAN79379.1|AE016757_283 (AE016757) Hypothetical ABC transporter ATP-binding protein ybiT
[Escherichia coli CFT073]
Length = 530
Score = 800 bits (2065), Expect = 0.0
Identities = 386/521 (74%), Positives = 462/521 (88%), Gaps = 2/521 (0%)
>gb|AAN42404.1|AE015106_1 (AE015106) putative ATP-binding component of a transport system
[Shigella flexneri 2a str. 301]
Length = 530
Score = 798 bits (2061), Expect = 0.0
Identities = 385/521 (73%), Positives = 462/521 (88%), Gaps = 2/521 (0%)
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Structural Features: | COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains
CD-Length = 530 residues, 97.9% aligned
Score = 589 bits (1521), Expect = 2e-169
Identities = 223/525 (42%), Positives = 335/525 (63%), Gaps = 12/525 (2%) |
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