ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6902

TrivialName: PA14_69520

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_69520

PAO1 Ortholog Locus:

Sequence Length: 3525

Protein Length: 1174

Start: 6202985

Stop: 6199461

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAO56042.1| (AE016864) conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 35/269 (13%)

Sequence:

ATGACTGCGCAGGCCACACCCCGGCGAGACAGCGCCAACCTGGCGGCAAACGAAGCCTCGTCCAGCGATAGT
CGTTCGCCGAGCGGCACCTGTCCGTTGATGAACGCCAAGGTGCAGCTGTTGCCGCTGCGCTACGGTTTGACC
GAAGGCGTCGATCCGAGCGCCGAGCTGGCGATGCCTTTCGCCCTGAAAAGCCGGCCGCTGGGTCTGCGGCTG
GTGCGCAATGGCTATCTCTACGTGATCGACGGCGGAACCGGAAAGCTGCACGAATACCGCATCGACAAGGGC
GCTATCGACAAGCTGCTGTGGCAGGACGCCGAGGTTCGCGCCGACGTACGCAGCCGCGCGGTCGGCGAGCCC
CAACTGGTCTTTCCCCGTACCAGCGTCCTGTACGTGGCCTATTCGGAGCTGCAATGGACCGCGCGCAAGTGC
ATGCAGGTGCTCGCCAGTCCGAAGGACCGCGAGCACTTCATGCAGGCCGTCGATCTGCGCCGCGCCGACCCG
CAGCAGGGGGGGCCGCATCTGCTGACCCGACGGCAGGCGGAAACCTGGCTGGCCGAAGTGGTGCAGAACAAG
GTGCATCGCGACGAGCAGGGCCAGCAGCGCTTCCCGCCCCACCAGCAGCGCCCGGCCAGTCCACCCGCCGCC
CATCCGGACGAACGACGCGACTACGTCTGGGAGGATCCGCCGCTGTTCCGCGATACCCAGCTCGGCGAGTTG
ACTGCGCAGGTACTCCCGCAGTACGAGCATGATGCCCTGTTCCTGGCGCTGCGCGACGACATCGGTGTGATG
CGCGACCTAGCCGCCTACCAGGACGAAGTGGTCGGCTGGCTCGAGGAATGGCTGCAGGGCGGCGCCCAGGCC
GGGGCCAACGAGCGCGACTACGTGATCGCCTGCTACATCGAGTCGTTGACCCAGATCCGCGCCGCGGAACTG
CCCAAGCTGGCCGACGAGAGTGCCCAGCCGCTGTTCGACGATCTCGACCGGCTGCCACCTCCCGAGCGGGAG
CGATCGCGCCAGGCCTTGCTGGACTACCTCAACGGCGAGCCGTTGCCGAAGCCGATGGACCCCGCCATGCCG
GAGCCGCTGCACAGACCTGTGGAGCGACACTTCACCAAGCGGAAAATGGCGGTTGCCGATCCGGCCTTCGTC
GAACGCAACCTGGACGCCCTGATCCGCCTGAAGAAGAGCCACGGCGAAAAGGTCGATGACGCGCTGCATGGC
GCCAAGTTTGGCCAGCGTGGCATCGACGACCTGATCGACCGTCCCGCCATGGATTCCTTCCTCGCCGCCAAC
AGGCCCAACCTGGCGCGCTGGAACGCCCTGCTCGAGCAGATCAGCGCAGACCGCACGCAGATGCTTACCGAG
CAGCGATTCCATCGCGCCGCCTGGTACTACGATTTCCAGCAGGCCGAGCAATTGGGACTGGCCTTCGCCACC
CAGTACGCCTGCCTGAAGGATATCTGCCGCAGCGACGAGGCCAGCGAGGCCGTGCTCGCCTTCCTGGAGGAA
AATCCGCAATACGATCGCCCATTGTTCCAGACTCTGCCGTTGAACACCCAGGCCGAACTGATCGCGCAATAC
GCGCAGCTCGGGCCGCCCGGCCATCTCTGGCTCTCCAAGCTGAAAGAGTGGGCGCAGCAGCGCGACTCGCTG
GAGCTGGGCAAGCTGCCCGCTCTCGACGGCTTGCCGGAGGCCACCCGAGCGCTTGCCGACAGCGCCCAGGCC
ACGCTCAACCCGGCGTTGACCCTGGGCATCAGCCGGACCATGGAGGGCTTCTTCAAGAGCGTAGGCCAGCAG
CAGGCGCCGGATCTCGACGCGCTGTTCCGCAAGCTGCCCAAGGCCCTTCCCGGTCGCCTGCTCGACGCCGCG
GTCCGCGAAGGGGTGACCTTCACCATTGCCAGCGAAGCGGAAAAGGCCATCCTCCAGGCCGACCTGAAGGAA
GTGCTCGAACAGCGCGCGGAACTGCGCCGGCTGGTCCGCCAGCGCAAGCAGGTGAAGAGCCAGGCCGGACAC
AAGTCGACGGACGCCCGCGCCTTGCTCGCCGACATCCAGCGTGTCCGCCTCCAGCTCAACGCCCTGGAGCCG
CGCCTGGCCGCCGCCCTCAGCCCGATCGCCGAGCTTCCGGACAACAGCATCCGTCTCGCCGGTGCGACACCA
GGCCGCGCCGGAATCACCTTGATCCTGCCGTCTGCACAGTTACAGGAAGTTGCCAGTGGTATCCGTAACCTG
CGCAATGGCTATAGCAGTGCAGCCGCGTTCAATAAGGTGGGGGATGGAATTGGTCTGGCTGTGTTTGTGGCG
CAGTTTGTCAATATGGTGCAGGTATGGCGGGGGGTTATCGCGACTTCACCGGATAAGCGTGAGCTAATGCCG
CTGGCTGGTTCTATTTTCACCACAATATCTGCGGGCGTAGCGGCAGCTCAGGCCATTGCCGATACAGCTCTT
CAGGCCAGAAGTGTTCAGTTGGCACAGGGGCTGCAGAACCACGCTGTGGAAGTTGCTCATGTACAAATGGGA
AAACTGCACTTACGCCTAGGGTTTGTGGGATATGCGGCAGGTTTTTTTGCAGCAGCTGTTGCTACTCAAACC
CACTATGGCGAGTGGCTTGGTGCTATACGCAGCGGAAATGCTCAAGCTCAGCAAGGTGCCGCTTTAGCTATG
GTTGGCTCCAGCGGAATGCTGGCCAGCAGCGCCTACGGGGTATGGCATACGGGGTATGCTTTAAAAGGTGTG
CTCAGGGCTGCAACACCTGCTGCCGAGCGTACAGCCTGGGCATTGGCTGGCACGCGACTTTCGAGCATATTT
GCTCGATTCAATATCGCCGGTGCCATTTTCACCGCCCTCGAACTGGTAGGAACCTATTGGTATAACCGCAGT
AATACCACGCCCCATGACGATTGGTTGCTCAGTACACCCTGGAGCCGCGACATCGGAGGGCGCCTGAACCAG
TCCCTGGAAATCTATCAGCAACGACTTCTGGGGATCGTCCAGACGCCAAGAGGTGAGGTCAAGCACGCGAGT
CATGGCAGTTGGTGGCGAGACCTGCTCTCCTCATCTGCCACTGCGGAGATCAGCCTAGCCTTGCCTGGTATC
AGTCTGGGAGCACTGCAGCAGACCTTGGCCGGGCGCCCTGAAGTACGCTTGAGCCTGGCGGCCTACCGCATT
CGTAGTGTGAAATACGAAAGAGGTTCGCCCATGGTGCGTTGGTTCCCCGTCACCGAAGTTGTCGGCGACAGT
CTACAGGTCGCGTCCGCCGAACCGTTGGTGTTGCTGGTGCCGCGGCTAGCGCCGCTGGAGGGTGTGACCGGG
GGCTCGGTCACGGAGGATCTATTACTGGCTGTACAGATCGAACGACTGAACCCGCAGGGTCAATATCATGCC
GATCGGCACATGGTTCGCCTGTCGCCACACAGCGAAGGAGACTATCCTGCTTCGCCACAACGTATCCAGGGG
CAGGAAGCATCCTGGATGCTAATTGACCCCCGTTTGCTGCCGGATTTTGCCGATGCTCCAGAACGATAA

Translation:

MTAQATPRRDSANLAANEASSSDSRSPSGTCPLMNAKVQLLPLRYGLTEGVDPSAELAMPFALKSRPLGLRL
VRNGYLYVIDGGTGKLHEYRIDKGAIDKLLWQDAEVRADVRSRAVGEPQLVFPRTSVLYVAYSELQWTARKC
MQVLASPKDREHFMQAVDLRRADPQQGGPHLLTRRQAETWLAEVVQNKVHRDEQGQQRFPPHQQRPASPPAA
HPDERRDYVWEDPPLFRDTQLGELTAQVLPQYEHDALFLALRDDIGVMRDLAAYQDEVVGWLEEWLQGGAQA
GANERDYVIACYIESLTQIRAAELPKLADESAQPLFDDLDRLPPPERERSRQALLDYLNGEPLPKPMDPAMP
EPLHRPVERHFTKRKMAVADPAFVERNLDALIRLKKSHGEKVDDALHGAKFGQRGIDDLIDRPAMDSFLAAN
RPNLARWNALLEQISADRTQMLTEQRFHRAAWYYDFQQAEQLGLAFATQYACLKDICRSDEASEAVLAFLEE
NPQYDRPLFQTLPLNTQAELIAQYAQLGPPGHLWLSKLKEWAQQRDSLELGKLPALDGLPEATRALADSAQA
TLNPALTLGISRTMEGFFKSVGQQQAPDLDALFRKLPKALPGRLLDAAVREGVTFTIASEAEKAILQADLKE
VLEQRAELRRLVRQRKQVKSQAGHKSTDARALLADIQRVRLQLNALEPRLAAALSPIAELPDNSIRLAGATP
GRAGITLILPSAQLQEVASGIRNLRNGYSSAAAFNKVGDGIGLAVFVAQFVNMVQVWRGVIATSPDKRELMP
LAGSIFTTISAGVAAAQAIADTALQARSVQLAQGLQNHAVEVAHVQMGKLHLRLGFVGYAAGFFAAAVATQT
HYGEWLGAIRSGNAQAQQGAALAMVGSSGMLASSAYGVWHTGYALKGVLRAATPAAERTAWALAGTRLSSIF
ARFNIAGAIFTALELVGTYWYNRSNTTPHDDWLLSTPWSRDIGGRLNQSLEIYQQRLLGIVQTPRGEVKHAS
HGSWWRDLLSSSATAEISLALPGISLGALQQTLAGRPEVRLSLAAYRIRSVKYERGSPMVRWFPVTEVVGDS
LQVASAEPLVLLVPRLAPLEGVTGGSVTEDLLLAVQIERLNPQGQYHADRHMVRLSPHSEGDYPASPQRIQG
QEASWMLIDPRLLPDFADAPER*

AnnotationID:6903 GeneID:6902

AnnotatorUID: danlee

Modification Date/Time: 2005-10-08 13:01:34

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|75824450|ref|ZP_00753904.1|  COG1108: ABC-type Mn2+/Zn2+ transport systems, 
permease components [Vibrio cholerae RC385]
     Length=1021
     Score =  248 bits (634),  Expect = 8e-64
     Identities = 211/699 (30%), Positives = 317/699 (45%), Gaps = 107/699 (15%)

Structural Features:

Genomic Context:

Comment:

ReferenceID:13501

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30883