ViewGene

Locus Name:
GeneID:
Location:

GeneID:684
TrivialName: PA14_51360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51360
PAO1 Ortholog Locus:PA1001
Sequence Length:1593
Protein Length:530
Start: 4565960
Stop: 4564368
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04390.1|AE004533_1 (AE004533) anthranilate synthase component I [Pseudomonas aeruginosa PAO1]
Identities = 522/530 (98%), Positives = 523/530 (98%)
Sequence:
ATGGGCGCGGGGAGATGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTG
GTGCCGGAGGCGCTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGAC
AGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGCTGCCTGCGCATCGAGTGCTGGGGGCGCGATGTA
GTGCTGCGGGCGTTGAACGCCAATGGACGCGCCTTGCTGGCACCGTTGAGCGAGGCCTGTCCGGCCCAGGTC
ACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCAGGCGGACGAGTGGCGA
CGCCTGCATGGCCTGTCCAGCCTGGAGGCGCTGCGCCGCGTGCTCGGAACGCTGGGCGACGCGGAGGAGCCT
GCGCTGCTGGGCGGCCTGTTCAGTTTCGACCTGGCCGAGCAGTTCGAACCCTTGCCGGCGCCGGCCGAACCT
GCGCGGCATTGCCCGGACTACCTGTTCCTGGTGCCGGAGTTGCTGCTGGATATCGATCACCTGGCGCGCCGG
ACTTCGCTGCAGGCGTTCGTCCACGATCCGGCCGGGCACGACAGGTTGGCCGCCAGCCTGCGCCAGTGTGCC
GACGAATTCCATGGCGCCGTGGAGGAGGCTTCCGAGTCGCCGGTGGCAGGCGTACGGGCCGGCAACTACCAG
GTCGACCTGGACGATGCGAGCTTTGCTCGCCAGGTGGAGCGCCTGCAGGCCCACGTGAGGGCCGGCGACGTG
TTCCAGATCGTACCGTCGCGCAGCTTCAGCATGCCgTGCGCGGACCCCTGGCGGGCCTATCGCCAGTTGTGC
CtgggCAACCCCAGCCCGTACCGCttCTTCCTcgATGCGGGGGACTTCTGCCTGTttggcGCTTCGCCGGAG
TCGGCATTGAAGTACGACggggagAGTCGCGAGGTGGAACTCTACCCCATTGCCGGCACTCGCCCGCGCGGA
CGCGATGCCCGGGGCGCCATCGATGCGGAACTGGACAATCGCCTGGAAGCGGAGTTGCGCCTGGACGCCAAG
GAGATCGCCGAGCACATGATGCTGGTCGACCTGGCGCGCAACGATCTGGCGCGGGTCTGCCGCAGCGGTACG
CGGCAGGTGCGCGACATGCTCAAGGTGGATCGCTACAGCCACGTGATGCACCTGGTCTCGCGCGTGGCTGGC
GAACTGCATGGCGAACTGGATGCGCTGCATGCCTACCGTGCCTGCCTGAACATGGGCACCCTGGTCGGTGCG
CCGAAGGTCCGTGCCATGCAGTTGCTGCGGCAGTACGAGGATGGCTATCGCGGCAGCTACGGTGGCGCGATC
GGCATTCTCGACAGCGCCGGCAACCTCGATACCAGCATCGTCATCCGCTCCGCCGAGGTCCGCGAAGGTATC
GCGCGGGTCCGGGCAGGCGCCGGCGTGGTGCTGGATTCGGATCCACGGCTGGAGGCCGAGGAAACCCGCAAC
AAGGCGCTGGCGGTGCTGACCGCCGTGGCCGCTGCCGAACGCGAAAGGGGAGAGCGCGATGCGCATCACGCT
GTTGGATAA
Translation:
MGAGRWLVSGVGYRLEESLEYRTLVPEALSIWRMAGANRMLFDCFDVDSKAARRSVAILSSCLRIECWGRDV
VLRALNANGRALLAPLSEACPAQVTCLRDGDTLHWRFPQEESQADEWRRLHGLSSLEALRRVLGTLGDAEEP
ALLGGLFSFDLAEQFEPLPAPAEPARHCPDYLFLVPELLLDIDHLARRTSLQAFVHDPAGHDRLAASLRQCA
DEFHGAVEEASESPVAGVRAGNYQVDLDDASFARQVERLQAHVRAGDVFQIVPSRSFSMPCADPWRAYRQLC
LGNPSPYRFFLDAGDFCLFGASPESALKYDGESREVELYPIAGTRPRGRDARGAIDAELDNRLEAELRLDAK
EIAEHMMLVDLARNDLARVCRSGTRQVRDMLKVDRYSHVMHLVSRVAGELHGELDALHAYRACLNMGTLVGA
PKVRAMQLLRQYEDGYRGSYGGAIGILDSAGNLDTSIVIRSAEVREGIARVRAGAGVVLDSDPRLEAEETRN
KALAVLTAVAAAERERGERDAHHAVG*
AnnotationID:693GeneID:684
AnnotatorUID: danlee
Modification Date/Time: 2004-05-14 17:05:33
Gene Name:phnA
Confidence Code:1
GeneProduct:anthranilate synthase component I
Cell Localization:()
Synonyms:PA1001
Cell Localization Confidence Code:5
MolecularFunction:required for PQS synthesis
Functional Category:(21) Quinolone signal response
Alternate Gene Product Name:phenazine biosynthesis protein PhnA
Functional Category Confidence Code:5
COGs:COG0147, pfam00425
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I. Score: 407, 1e-114
pfam00425, Chorismate_bind, chorismate binding enzyme. Score: 342, 6e-95
Genomic Context:
PhnB is downstream and has been reported to be cotranscribed.
Comment:
ReferenceID:1371
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:18513
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:32106
Author/Investigator(s): Essar DW, Eberly L, Hadero A, Crawford IP.
Title: Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications.
PubMed: 90130326
MedLine:
Source:
Reference Type:Journal
Data:
URL:
ReferenceID:32107
Author/Investigator(s): Gallagher LA, McKnight SL, Kuznetsova MS, Pesci EC, Manoil C.
Title: Functions required for extracellular quinolone signaling by Pseudomonas aeruginosa.
PubMed: 12426334
MedLine:
Source:
J Bacteriol. 2002 Dec;184(23):6472-80.
Reference Type:Journal
Data:
URL:
Homologs By Global Alignment
Gene ID:684

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
1159 PA1001_tr translation of PA1001 530 98.49 98.67 0 2692.0
42608 gb|AAG04390.1|AE004533_1 (AE004533) anthranilate synthase component I [Pseudomonas aeruginosa PAO1] 530 98.49 98.67 0 2692.0
42609 gb|AAA88448.1| (M33810) anthranilate synthase alpha subunit [Pseudomonas aeruginosa] 530 98.49 98.67 0 2692.0
42610 gb|AAA88451.1| (M33811) anthranilate synthase alpha subunit [Pseudomonas aeruginosa] 530 98.49 98.67 0 2691.0
42621 emb|CAC91014.1| (AJ414151) anthranilate synthase component I [Yersinia pestis CO92] 544 47.61 59.92 37 1141.0
GC ORFID: 43686How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA1001Glimmer Score:
Start: 387947Stop: 389539
Length: 1593
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: t_PA1001 translation of PA1001Homolog Bit Score 1041.0
Other Homologs: t_PA0609 (ORF: BLASTX 237.0), t_PA1001 (ORF: GLIMMER)
GC ORF Sequence
ATGGGCGCGGGGAGATGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTG
GTGCCGGAGGCGCTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGAC
AGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGCTGCCTGCGCATCGAGTGCTGGGGGCGCGATGTA
GTGCTGCGGGCGTTGAACGCCAATGGACGCGCCTTGCTGGCACCGTTGAGCGAGGCCTGTCCGGCCCAGGTC
ACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCAGGCGGACGAGTGGCGA
CGCCTGCATGGCCTGTCCAGCCTGGAGGCGCTGCGCCGCGTGCTCGGAACGCTGGGCGACGCGGAGGAGCCT
GCGCTGCTGGGCGGCCTGTTCAGTTTCGACCTGGCCGAGCAGTTCGAACCCTTGCCGGCGCCGGCCGAACCT
GCGCGGCATTGCCCGGACTACCTGTTCCTGGTGCCGGAGTTGCTGCTGGATATCGATCACCTGGCGCGCCGG
ACTTCGCTGCAGGCGTTCGTCCACGATCCGGCCGGGCACGACAGGTTGGCCGCCAGCCTGCGCCAGTGTGCC
GACGAATTCCATGGCGCCGTGGAGGAGGCTTCCGAGTCGCCGGTGGCAGGCGTACGGGCCGGCAACTACCAG
GTCGACCTGGACGATGCGAGCTTTGCTCGCCAGGTGGAGCGCCTGCAGGCCCACGTGAGGGCCGGCGACGTG
TTCCAGATCGTACCGTCGCGCAGCTTCAGCATGCCgTGCGCGGACCCCTGGCGGGCCTATCGCCAGTTGTGC
CtgggCAACCCCAGCCCGTACCGCttCTTCCTcgATGCGGGGGACTTCTGCCTGTttggcGCTTCGCCGGAG
TCGGCATTGAAGTACGACggggagAGTCGCGAGGTGGAACTCTACCCCATTGCCGGCACTCGCCCGCGCGGA
CGCGATGCCCGGGGCGCCATCGATGCGGAACTGGACAATCGCCTGGAAGCGGAGTTGCGCCTGGACGCCAAG
GAGATCGCCGAGCACATGATGCTGGTCGACCTGGCGCGCAACGATCTGGCGCGGGTCTGCCGCAGCGGTACG
CGGCAGGTGCGCGACATGCTCAAGGTGGATCGCTACAGCCACGTGATGCACCTGGTCTCGCGCGTGGCTGGC
GAACTGCATGGCGAACTGGATGCGCTGCATGCCTACCGTGCCTGCCTGAACATGGGCACCCTGGTCGGTGCG
CCGAAGGTCCGTGCCATGCAGTTGCTGCGGCAGTACGAGGATGGCTATCGCGGCAGCTACGGTGGCGCGATC
GGCATTCTCGACAGCGCCGGCAACCTCGATACCAGCATCGTCATCCGCTCCGCCGAGGTCCGCGAAGGTATC
GCGCGGGTCCGGGCAGGCGCCGGCGTGGTGCTGGATTCGGATCCACGGCTGGAGGCCGAGGAAACCCGCAAC
AAGGCGCTGGCGGTGCTGACCGCCGTGGCCGCTGCCGAACGCGAAAGGGGAGAGCGCGATGCGCATCACGCT
GTTGGATAA