Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG08367.1| AE004911_2 (AE004911) probable two-component sensor [Pseudomonas aeruginosa PAO1]
Identities = 759/770 (98%), Positives = 762/770 (98%)
Sequence:
TTGGCTGGACGACAGCGTGCGCGACTATCGGCGCCTCGCCGGCAACCGCGCGGACGCCTGGTGAGCGGCCGC
GGCGGAGTGTTGGCGCGGCGCCTGCTGTGGCGGGTGCTGCTGTTCAGCCTGTGTTTCACTGTCCTCGCCGGC
GCCGTGCAGCTGTTCTTCGAATACCGCCGCGAAATGCGTGAGATCGAGGCGCGCCTGGAACTGATCCGCAGC
GGCTACCTGGCCAGCTTCGAGCGCAGCCTGTGGGATCTCAACCAGGAGCAGTTGAACGTGCAGTTGCGCGGC
CTCGGGGATTTCCCCGACATCGCCCGTGTCAGTCTGCAAAGCGCCGACTTCAACCTGCTGCAGGGCGACCAG
CGTCCACGCGGCCTGCTGCGGGTCGAGCGCTTTCCCTTGAGCTACCAGCCGCCGGGGGGCGAGCGTCGGCAT
CTGGGCGAGCTGGAGATCGCCATCGACCTGGCGGCGGTCTATCGCCGGCTGGCCTCCGGCGGCCTGGCCAGC
CTCTTGTGGATGGGCAGTTTCCTTTGCGGCCTGGCGGTGGCCCTCAGTTGGCTGTTCCACAGCCTGGTCACT
CGCCATCTGTGGCGCATGTCCGAGTTCGCTGGGCATATCGCCGAAGGCGACCTGCAACAGCCGCTGCGACTG
GACAAGGCGGACCGCGAACGCGACGAGATCGACGCCGTCGCCGCCGCCCTGGAGGACATGCGCCAGGCCCTG
CGCACCGATCGCCGCCGGCGCGACGCTGACCGCGACGAGTTGCGTCGGCAGGTCGAGCGGCGCACCGCCAGC
CTGCGCCGGGCGAAGGACCAGGCGGAAGCCGCCGACCGTGCCAAGAGCCGTTTCCTCGCGACCATGAGCCAT
GAGATCCGTACCCCGCTGAACGGCATCCTGGGCATGGCCGAGCTGCTGCGCGAGGCATCGCTCGGCGAGCGT
GACCGCCAGCGCCTGCGGGCACTGGCGACAGCGGGGGAGGGACTGCTGGCGATCCTCAACGAGGTCCTCCAC
TTCGCCCGGCTGGAGGAAGCGGCGGATGTGCCGGAAGCGGTGGACTTTTCCTTGCGGAGCCTGCTCGAGGAC
GTCCTCACCCTGCTCGAACCGCGGGCGCGGGAGAACGCCACGCGGCTGGACCTGTGGCTGGACCCGCAGGTT
CATGACGGCCATCGCGGCGCCGAGCAGTTCCTGCGCCAGGTGTTGACCAACCTGCTGGGCAACGCGGTGAAG
TTCACCGAGGCCGGCGAGGTGCGCGTTCGCGTCGAGCGGCTGGCGCGCAGCGCAGGAAGCGAGCGCCTGCGG
CTGAGCGTCGCGGACGATGGAATCGGCATTCCCGAGGAAATGCGCGAACGCATCTTCGAACGCTTCACCCAG
GGCGGCGACGCCGTGACCCGCCGTTACGGCGGAACCGGCCTGGGCCTGGCGATCAGCAAGCGGCTGGTGGAA
GCGCTGGGCGGGCGGATCGGCGTGGAAAGCCGGGTCGGCCAGGGCAGTACGTTCTGGTTCGAGATCGAGCTG
GCGCTGGCGAGCTTGTCCGGCGCGACGCCGCCGGCGGCATCGGTGTCTGCGCTGGAGGTGCTGCTGGTGGAG
GACGTGGCGCTCAACCGCGAGGTAGCCCAGGGCCTGCTCGAGCGGGACGGCCACCGGGTGATGCTGGCCGAG
GACGCGGGGCCGGCCCTGGCGCTGTGCCGGCAGCGGCGCTTCGACCTGATCCTGCTGGACATGCACCTGCCG
GGGATGGCTGGCCTCGAGCTTTGCGCCGGGATTCGCCGGCAGCTCGACGGCCTGAACCGCGCCACGCCGGTC
TTCGCCTTCACCGCCAGCATCCAGCCGGACATGGTGCGTCGGTACTTCGCCGCGGGCATGCAGGGCGTGCTC
GGCAAGCCCCTGCGGATGGACGAGCTGCGCCGCGCGCTGGGCGAGGTCGGAACCGGCGTGCCTGCGCTTGCG
GCGGACGCCGCGCTGGACCGGCAAATGCTCGAGACCCACCGCCGCCTGCTGGGGCGGCACAAGCTCGCCGGA
CTGCTGGGCAACCTGCTGGGAAGCCTgGACGAGCAGTTGCCGCTGCTGGCCGAAGCCCTGGACCAGGTGGAC
CTGGCCGAGGCGGCGAACATCGCCCATCGCCTGTCCGGAAGCTGCCACTCCATGGGCCTGGTGGCGCTCGGC
GCCGGCCTGGGCGAGCTGGAGCGCGAGGCCCTGGGCGCGGCCGGGGTCGACCCGCGAGCCTGGGGCGCACGC
CTGGGTAGCCTGCGCCGCGACGGCGCAGAAGCCCTGCGCCGCGCCGGCTTCCTCGGCGAAGCCGACTCAGCG
GCCGGTTGA
Translation:
MAGRQRARLSAPRRQPRGRLVSGRGGVLARRLLWRVLLFSLCFTVLAGAVQLFFEYRREMREIEARLELIRS
GYLASFERSLWDLNQEQLNVQLRGLGDFPDIARVSLQSADFNLLQGDQRPRGLLRVERFPLSYQPPGGERRH
LGELEIAIDLAAVYRRLASGGLASLLWMGSFLCGLAVALSWLFHSLVTRHLWRMSEFAGHIAEGDLQQPLRL
DKADRERDEIDAVAAALEDMRQALRTDRRRRDADRDELRRQVERRTASLRRAKDQAEAADRAKSRFLATMSH
EIRTPLNGILGMAELLREASLGERDRQRLRALATAGEGLLAILNEVLHFARLEEAADVPEAVDFSLRSLLED
VLTLLEPRARENATRLDLWLDPQVHDGHRGAEQFLRQVLTNLLGNAVKFTEAGEVRVRVERLARSAGSERLR
LSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGGRIGVESRVGQGSTFWFEIEL
ALASLSGATPPAASVSALEVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPALALCRQRRFDLILLDMHLP
GMAGLELCAGIRRQLDGLNRATPVFAFTASIQPDMVRRYFAAGMQGVLGKPLRMDELRRALGEVGTGVPALA
ADAALDRQMLETHRRLLGRHKLAGLLGNLLGSLDEQLPLLAEALDQVDLAEAANIAHRLSGSCHSMGLVALG
AGLGELEREALGAAGVDPRAWGARLGSLRRDGAEALRRAGFLGEADSAAG*
AnnotationID:6823 GeneID:6822
Modification Date/Time:
2006-03-21 12:12:31
GeneProduct: putative sensor histidine kinase/response regulator
Cell Localization Confidence Code: 5
Functional Category: (28) Two-component regulatory systems
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies): signal transduction mechanism
Homology: gi|9951266| gb|AAG08367.1| probable two-component sensor [Pseudomonas aeruginosa PAO1]
gi|15600175| ref|NP_253669.1| probable two-component sensor [Pseudomonas aeruginosa PAO1]
Length=998
Score = 1253 bits (3241), Expect = 0.0, Method: Composition-based stats.
Identities = 759/770 (98%), Positives = 762/770 (98%), Gaps = 0/770 (0%)
gi|84317575| ref|ZP_00966014.1| COG0642 : Signal transduction histidine kinase [Pseudomonas aeruginosa
C3719]
Length=750
Score = 1210 bits (3131), Expect = 0.0, Method: Composition-based stats.
Identities = 738/750 (98%), Positives = 741/750 (98%), Gaps = 0/750 (0%)
gi|84323674| ref|ZP_00971742.1| COG0642 : Signal transduction histidine kinase [Pseudomonas aeruginosa
2192]
Length=750
Score = 1205 bits (3117), Expect = 0.0, Method: Composition-based stats.
Identities = 737/750 (98%), Positives = 741/750 (98%), Gaps = 0/750 (0%)
Structural Features: COG0642 , BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].
CD-Length = 336 residues, only 71.1% aligned
Score = 152 bits (384), Expect = 2e-37
COG2205 , KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].
CD-Length = 890 residues, only 28.1% aligned
Score = 133 bits (336), Expect = 7e-32
COG5002 , VicK, Signal transduction histidine kinase [Signal transduction mechanisms].
CD-Length = 459 residues, only 49.2% aligned
Score = 121 bits (305), Expect = 3e-28
Comment: Similar in length to genes from P. aeruginosa strains 2192 and C3719, but lacking the
N-terminal 221 amino acids of PAO1 PA4982 .
In place of PA4982 N-terminus, PA14 (and strains 2192 and C3719) have GID6823 (PA14_65870).