ViewGene
Locus Name:
GeneID:
Location:

GeneID:6769
TrivialName: PA14_63740
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63740
PAO1 Ortholog Locus:
Sequence Length:369
Protein Length:122
Start: 5683221
Stop: 5682853
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN68254.1|AE016459_8 (AE016784) conserved hypothetical protein [Pseudomonas putida KT2440]
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Sequence:
ATGCGCCTCCTGATCTGCGCCGGACGCCATTTCAAGGACGCCGAACGCCTGTGCCTGGCGCTCGACCAGTGC
CACGGCCTGCAACCGGTGGCGCTGCTCGGCCACCTGCTGCATGCCGGCAGCGGCCTGCCGGACGAGGCCGAG
CGCTGGTGCCGCGAGCGTGGCGCGGATTCGCGCGCCTACGATTATCCGGAGCGCAGTGGCAGCGACAACGCC
CTGCGCGAGTATGGCGAGGCCGTCCTCGGCGATGCCGCGCCGGACCTGCTGCTGGTGTTTCCCGGTGGGCGC
CTGGCCAGCGAACTGATACAGGTCGCGCACGCTGCCGACGTCCCGCTGATGCTCGCCTATCGCCCGCTGTCG
GCGCCCTGA
Translation:
MRLLICAGRHFKDAERLCLALDQCHGLQPVALLGHLLHAGSGLPDEAERWCRERGADSRAYDYPERSGSDNA
LREYGEAVLGDAAPDLLLVFPGGRLASELIQVAHAADVPLMLAYRPLSAP*
AnnotationID:6770GeneID:6769
AnnotatorUID: diggins
Modification Date/Time: 2004-11-04 20:08:09
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:13270




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30622




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:35189




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:6769_cdd.html


    		




 
URL:









      

          
GC ORFID: 49771How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4946901Stop: 4946533

          
Length: 369


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCGCCTCCTGATCTGCGCCGGACGCCATTTCAAGGACGCCGAACGCCTGTGCCTGGCGCTCGACCAGTGC 
CACGGCCTGCAACCGGTGGCGCTGCTCGGCCACCTGCTGCATGCCGGCAGCGGCCTGCCGGACGAGGCCGAG 
CGCTGGTGCCGCGAGCGTGGCGCGGATTCGCGCGCCTACGATTATCCGGAGCGCAGTGGCAGCGACAACGCC 
CTGCGCGAGTATGGCGAGGCCGTCCTCGGCGATGCCGCGCCGGACCTGCTGCTGGTGTTTCCCGGTGGGCGC 
CTGGCCAGCGAACTGATACAGGTCGCGCACGCTGCCGACGTCCCGCTGATGCTCGCCTATCGCCCGCTGTCG 
GCGCCCTGA