ViewGene
Locus Name:
GeneID:
Location:

GeneID:6685
TrivialName: PA14_58980
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_58980
PAO1 Ortholog Locus:
Sequence Length:225
Protein Length:74
Start: 5255897
Stop: 5256121
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAO57408.1| (AE016870) hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000]
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Sequence:
ATGAAGAACAAGATTGAGGATCTGCGGAATCACCTCTTTGCCACCATCGAAGGGTTGCTTGACGAAGACAAG
CCCCTGGATATCGAGCGCGCGAAAGCGGTGGCTCATGTCGGTTCGGTGATCATCGAGTCCGCCAAGGTGGAA
GTGAAAGCGCTGGAGATCATCGGCTCCCCGGGCGGCAGAGGAAGCACGTTTCTGCAGATCAGCCGGGAGGAC
TCGAAGTGA
Translation:
MKNKIEDLRNHLFATIEGLLDEDKPLDIERAKAVAHVGSVIIESAKVEVKALEIIGSPGGRGSTFLQISRED
SK*
AnnotationID:6686GeneID:6685
AnnotatorUID: danlee
Modification Date/Time: 2005-08-26 15:03:59
Gene Name:
Confidence Code:4
GeneProduct:Conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
CP8 (pseudomonas aeruginosa strain C, plasmid pKLC102)






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:13132




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30460




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49687How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4519576Stop: 4519800

          
Length: 225


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGAAGAACAAGATTGAGGATCTGCGGAATCACCTCTTTGCCACCATCGAAGGGTTGCTTGACGAAGACAAG 
CCCCTGGATATCGAGCGCGCGAAAGCGGTGGCTCATGTCGGTTCGGTGATCATCGAGTCCGCCAAGGTGGAA 
GTGAAAGCGCTGGAGATCATCGGCTCCCCGGGCGGCAGAGGAAGCACGTTTCTGCAGATCAGCCGGGAGGAC 
TCGAAGTGA