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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08601.1|AE004934_8 (AE004934) probable permease of ABC iron transporter [Pseudomonas aeruginosa PAO1]
Identities = 539/539 (100%), Positives = 539/539 (100%)
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Sequence:
GTGGCCCATCCCGCTCCCCGCCGCTGGTACCCCATCACCTTCACCGTTGCCGCGCTGGTGCTGCTGCCGCTC
AGCGTGCTGCTGCTGAGCTGGCTGGAGATCGACCGGGAAATCTGGAGCCACCTGTGGGATACCCAGTTGCCG
CGCCTGCTCGGCAACACCCTGACCCTGGTGCTCGGCGTCGGCATCGGCGTGACTCTGCTCGGGGTCAGCCTG
GCCTGGCTCACCAGCCTCTGCGAATTCCCCGGGCGGCGCTGGCTGGACTGGGCGCTGATGTTGCCGTTCGCG
ATCCCGGCCTACGTCCTGGCGTTCGTCTTCGTCGGCCTGCTGGATTTCGCCGGACCGGTGCAGAGCCTGCTG
CGCGAGTGGTTCGGCAGCGGCCTGCGGTTGCCGCGCGTACGCTCCACCGGCGGGGTGATCCTGGTCCTGGTG
CTGGTGTTCTATCCCTATGTCTACCTGCTCGCGCGCAGCGCCTTCATCGCCCAGGGCAAGGGCCTGATGGAA
GCCGCGCGGGTCCTCGGCCTGTCGCCCTGGCAGGCGTTCCTGCGGGTCGCCCTGCCGATGGCGCGGCCGGCG
ATCGGCGCCGGCCTGGCGCTGGCGGTGATGGAAACCCTGGCCGACTTCGGCGCGGTATCGGTGTTCAACTTC
GATACCTTCACCACCGCTATCTACAAGACCTGGTACGGCTTCTACAGCCTCTCCAGCGCCGCCCAGCTGGCC
AGCCTGTTGTTGCTCGGGGTATGCCTGGTGCTGCTCGGCGAGCGCCACACGCGAGGCCGGGCCAAGGCCGCC
AGCGAGCGTCCGCGCGGCGCGCCGCTGTACCGCCTGCGCGGCGCCAGGGCGCTGGCGGCGAGCGCCTGGTGC
GGGCTGGTGTTCCTCTGCGCCTTCGTGATTCCCGTGGCGCAACTGGTTGTCTGGTTCTGGCGCCAGGGCCGT
TTCGACCTCGACGAGCGCTACTGGGACCTGATCGGCCATACCCTGACGCTGGGCGGCATCGCCGCACTGGCG
ACGGTCGCCGTGGCCCTGCTGCTGGCCTTCGCCGTGCGCCTGGCGCCGACCCGCGCTATCCGCGGCGCGGTG
GGCCTGGGCAACCTCGGTTATGCGCTGCCAGGCTCGGTCCTGGCGGTTTCGATCATGCTGGCCTTCAGTTGG
CTGGACAATCACTGGGTGATCCCGCTTTCCAGCGCCCTCGGCGGCGCCGGCAAGCCGCTGCTGCTGGGCAGT
CTGTTCGCCCTGCTGCTGGCCTACCTGATCCGTTTCATGGCGGTGGCCTACGGGCCGCTGGAAAGCGGGCTG
GCGCGGATCCGCCCGTCGCTGCCGGAAGCCTCGCGCAGCCTCGGCGTGGGCGGCCCGCTGCTGTTCCTGCGG
GTCTACCTGCCGCTGTTGCTGCCGGCCTCGCTGAGCGCCGCGCTGCTGGTCTTCGTCGACGTGCTCAAGGAG
ATGCCGGCGACCCTGCTGATGCGTCCCTTCGGTTGGGACACCCTGGCCGTACGGATCTTCGAGATGACCAGC
GAGGGCGAATGGGCGCGCGCCTCGCTGCCGGCCCTGACCCTGGTGCTGGTCGGCCTGCTACCGGTGGTCGGG
TTGATTCGTCGTTCTGCCCATCATTCCGATCGCTGA |
Translation:
MAHPAPRRWYPITFTVAALVLLPLSVLLLSWLEIDREIWSHLWDTQLPRLLGNTLTLVLGVGIGVTLLGVSL
AWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQSLLREWFGSGLRLPRVRSTGGVILVLV
LVFYPYVYLLARSAFIAQGKGLMEAARVLGLSPWQAFLRVALPMARPAIGAGLALAVMETLADFGAVSVFNF
DTFTTAIYKTWYGFYSLSSAAQLASLLLLGVCLVLLGERHTRGRAKAASERPRGAPLYRLRGARALAASAWC
GLVFLCAFVIPVAQLVVWFWRQGRFDLDERYWDLIGHTLTLGGIAALATVAVALLLAFAVRLAPTRAIRGAV
GLGNLGYALPGSVLAVSIMLAFSWLDNHWVIPLSSALGGAGKPLLLGSLFALLLAYLIRFMAVAYGPLESGL
ARIRPSLPEASRSLGVGGPLLFLRVYLPLLLPASLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTS
EGEWARASLPALTLVLVGLLPVVGLIRRSAHHSDR* |
AnnotationID:666 | GeneID:657 |
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Modification Date/Time: |
2005-03-16 05:05:24 |
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GeneProduct: | putative iron ABC transporter, permease protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAO53860.1| (AE016857) iron ABC transporter, permease protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 538
Score = 863 bits (2230), Expect = 0.0
Identities = 434/534 (81%), Positives = 479/534 (89%)
>gb|AAN70760.1|AE016720_3 (AE016793) iron ABC transporter, permease protein, putative
[Pseudomonas putida KT2440]
Length = 540
Score = 845 bits (2184), Expect = 0.0
Identities = 438/534 (82%), Positives = 470/534 (88%), Gaps = 1/534 (0%)
>emb|CAD84941.1| (BX321859) iron transport system permease protein [Nitrosomonas
europaea ATCC 19718]
Length = 519
Score = 503 bits (1294), Expect = e-141
Identities = 271/521 (52%), Positives = 355/521 (68%), Gaps = 10/521 (1%)
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Structural Features: | COG1178, ThiP, ABC-type Fe3+ transport system, permease component
[Inorganic ion transport and metabolism]
CD-Length = 540 residues, 99.1% aligned
Score = 301 bits (773), Expect = 1e-82
Identities = 201/552 (36%), Positives = 271/552 (49%), Gaps = 30/552 (5%) |
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