ViewGene

Locus Name:
GeneID:
Location:

GeneID:6514
TrivialName: PA14_13210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13210
PAO1 Ortholog Locus:
Sequence Length:183
Protein Length:60
Start: 1138011
Stop: 1137829
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAO57993.1| (AE016872) conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000]
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Sequence:
ATGCAACTGCGAATGCACCCTTCGACCAAGGGCGGATGGATCGTCCAGGTCGGCGCCTATCGCATCCCCTTC
CATACCGAACGGGAAGGTCGGGAATATCTGCGCAAACTGCGCGAGCGGATCGAAGCCCCCCACGCGCTGCCC
GGTTCGCCCAAGCCCCGGATAATCCGCCAGGCCAGGTAG
Translation:
MQLRMHPSTKGGWIVQVGAYRIPFHTEREGREYLRKLRERIEAPHALPGSPKPRIIRQAR*
AnnotationID:6515GeneID:6514
AnnotatorUID: urbach
Modification Date/Time: 2004-03-08 13:01:01
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12824
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30131
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49516How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3815927Stop: 3816109
Length: 183
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCAACTGCGAATGCACCCTTCGACCAAGGGCGGATGGATCGTCCAGGTCGGCGCCTATCGCATCCCCTTC
CATACCGAACGGGAAGGTCGGGAATATCTGCGCAAACTGCGCGAGCGGATCGAAGCCCCCCACGCGCTGCCC
GGTTCGCCCAAGCCCCGGATAATCCGCCAGGCCAGGTAG