ViewGene

Locus Name:
GeneID:
Location:

GeneID:6503
TrivialName: PA14_13630
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13630
PAO1 Ortholog Locus:
Sequence Length:246
Protein Length:81
Start: 1173132
Stop: 1172887
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN68329.1|AE016466_14 (AE016784) hypothetical protein [Pseudomonas putida KT2440]
Identities = 44/73 (60%), Positives = 55/73 (75%)
Sequence:
ATGCATTGGCTGGACTACCTGCAATGGCCCGCCATGCTGGTCACGGTGGTGGCCGCCTGGCTGGTGGCGTCG
GCGCACCGGCGAAGACGCAAGGTCGGCTTCTGGGTGTTCCTCGCCAGCAACCTGCTGTGGATCGCCTGGGGC
CTGTACGCCCAGGCCTATGCCCTGATCCTGCTGCAGGTCTGCCTGGCGGCGATGAACCTGCGCGGCACCCAT
CGCAACGAAGCGCCACAGGACAGCGCCTGA
Translation:
MHWLDYLQWPAMLVTVVAAWLVASAHRRRRKVGFWVFLASNLLWIAWGLYAQAYALILLQVCLAAMNLRGTH
RNEAPQDSA*
AnnotationID:6504GeneID:6503
AnnotatorUID: diggins
Modification Date/Time: 2005-04-25 13:01:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12803
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30109
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49505How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3780806Stop: 3781051
Length: 246
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCATTGGCTGGACTACCTGCAATGGCCCGCCATGCTGGTCACGGTGGTGGCCGCCTGGCTGGTGGCGTCG
GCGCACCGGCGAAGACGCAAGGTCGGCTTCTGGGTGTTCCTCGCCAGCAACCTGCTGTGGATCGCCTGGGGC
CTGTACGCCCAGGCCTATGCCCTGATCCTGCTGCAGGTCTGCCTGGCGGCGATGAACCTGCGCGGCACCCAT
CGCAACGAAGCGCCACAGGACAGCGCCTGA