Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: emb|CAD24398.1| (AJ431260) TraJ protein [uncultured bacterium]
Identities = 102/122 (83%), Positives = 110/122 (90%)
Sequence:
ATGGACGACGAGAAGAGAGTCACGCGGAAGAGCAGCCCGCCCATCAAGGTGTACTGCCTTCCCGAAGAGCGT
GAACTGATCGAGGCGAACGCCAAGAGGGCGGGGATCAGCGTTGCGCGCTACCTGCGCGACGTGGGCCAGGGC
TACCAGATCAAGGGCGTCATGGATTACGAGTACGTGCGCGAGCTGGTGCGCGTGAATGGCGACCTTGGCCGG
CTAGGCGGCTTGCTCAAGCTTTGGCTCACCGACGACCCGCGCACAGCCCGCTTCGGCGATGACACGATCCTC
GCTCTGCTGGGTCGGATTGAGGCCACCCAGGACGAAATGAGCCGGCTCATGAAGTCGGTAGTGCAGCCGAGG
GTCGAATCATGA
Translation:
MDDEKRVTRKSSPPIKVYCLPEERELIEANAKRAGISVARYLRDVGQGYQIKGVMDYEYVRELVRVNGDLGR
LGGLLKLWLTDDPRTARFGDDTILALLGRIEATQDEMSRLMKSVVQPRVES*
AnnotationID:6447 GeneID:6446
Modification Date/Time:
2005-10-18 10:10:59
GeneProduct: oriT-binding protein, TraJ
Cell Localization Confidence Code: 5
Functional Category: (22) Related to phage, transposon, or plasmid
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: gi|19352415| ref|NP_598173.1| TraJ protein [uncultured bacterium]
Length=123
Score = 202 bits (513), Expect = 3e-51
Identities = 102/122 (83%), Positives = 110/122 (90%), Gaps = 0/122 (0%)
gi|73746025| ref|YP_302617.1| TraJ [Sphingomonas sp. A1]
Length=123
Score = 201 bits (512), Expect = 4e-51
Identities = 102/122 (83%), Positives = 110/122 (90%), Gaps = 0/122 (0%)
gi|58416275| emb|CAI47871.1| conjugal transfer protein TraJ [Achromobacter xylosoxidans]
Length=123
Score = 197 bits (501), Expect = 8e-50
Identities = 99/122 (81%), Positives = 109/122 (89%), Gaps = 0/122 (0%)
gi|77734016| emb|CAI10780.1| oriT binding protein [IncP-1beta multiresistance plasmid pB8]
gi|72384329| ref|YP_293682.1| TraJ protein of DNA transfer system [Ralstonia eutropha JMP134]
gi|32455805| ref|NP_862457.1| TraJ protein [Pseudomonas sp. ADP]
gi|62739049| gb|AAC64478.2| TraJ [Enterobacter aerogenes]
gi|72607200| gb|EAO43165.1| putative plasmid conjugal transfer protein [Burkholderia ambifaria AMMD]
gi|13937442| gb|AAK50253.1| TraJ protein [Pseudomonas sp. ADP]
gi|62765884| ref|NP_044275.2| TraJ [Enterobacter aerogenes]
gi|34500530| ref|NP_904301.1| TraJ [Delftia acidovorans]
Length=124
Score = 186 bits (471), Expect = 3e-46
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 0/121 (0%)
ReferenceID:16949
Author/Investigator(s):
Tauch,A., Schluter,A., Bischoff,N., Goesmann,A., Meyer,F. and
Puhler,A.
Title:
The 79,370-bp conjugative plasmid pB4 consists of an IncP-1beta
backbone loaded with a chromate resistance transposon, the
strA-strB streptomycin resistance gene pair, the oxacillinase gene
bla(NPS-1), and a tripartite
Source: JOURNAL Mol. Genet. Genomics 268 (5), 570-584 (2003)