ViewGene

Locus Name:
GeneID:
Location:

GeneID:6441
TrivialName: PA14_15560
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15560
PAO1 Ortholog Locus:
Sequence Length:309
Protein Length:102
Start: 1316812
Stop: 1316504
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK50235.1|U66917_2 (U66917) hypothetical protein [Pseudomonas sp. ADP]
Identities = 27/34 (79%), Positives = 30/34 (88%)
Sequence:
ATGGAACATTGGCTACATGAACGGATCGGCCCAGCCTACGATGCGTTGAAGGCCGACCCAGGCCGCGCCGTT
ACCGCTGACCAGGTGCGCACCCGTCTGGCCGACATCGCCCAAGCTATCGAACTGGCCCGCCGCGTCGATGCG
GACCTAGAATCCCTAACGCCCTTTGACCCGGCCGAAGACCTGACCACCGCCGAAGCCGTGGCCGCATTCTTG
GCGGACGCCGAGGCCACGGCCGACCCGGCTTATATCGAGCACGCGCACCAGGTCGCGGCACGTGCGCGAACC
ATGCACGGCATCGCGTCGTGA
Translation:
MEHWLHERIGPAYDALKADPGRAVTADQVRTRLADIAQAIELARRVDADLESLTPFDPAEDLTTAEAVAAFL
ADAEATADPAYIEHAHQVAARARTMHGIAS*
AnnotationID:6442GeneID:6441
AnnotatorUID: danlee
Modification Date/Time: 2005-10-18 14:02:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12692
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29987
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:31788
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:6441_cdd.html
URL:
GC ORFID: 49443How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3637125Stop: 3637433
Length: 309
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGAACATTGGCTACATGAACGGATCGGCCCAGCCTACGATGCGTTGAAGGCCGACCCAGGCCGCGCCGTT
ACCGCTGACCAGGTGCGCACCCGTCTGGCCGACATCGCCCAAGCTATCGAACTGGCCCGCCGCGTCGATGCG
GACCTAGAATCCCTAACGCCCTTTGACCCGGCCGAAGACCTGACCACCGCCGAAGCCGTGGCCGCATTCTTG
GCGGACGCCGAGGCCACGGCCGACCCGGCTTATATCGAGCACGCGCACCAGGTCGCGGCACGTGCGCGAACC
ATGCACGGCATCGCGTCGTGA