ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6436

TrivialName: PA14_15610

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_15610

PAO1 Ortholog Locus:

Sequence Length: 2607

Protein Length: 868

Start: 1324805

Stop: 1327411

Strand: +

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAN69289.1|AE016565_2 (AE016787) hypothetical protein [Pseudomonas putida KT2440] Identities = 239/872 (27%), Positives = 391/872 (44%), Gaps = 47/872 (5%)

Sequence:

ATGACGACGGAAGCAGAGGCGCTCGCCAACATCCTTGCGTGGTCTGCTGATAGTCCCGGCTGGCAGCGCGAC
GCACTGCGCCGACTTGCAACGCAAGCGGCTCTGGAGCCGGCCGAGATCGACGAGCTGGCTTCCATCTGCAAG
GGCGACAATCCGGCGGTCCCGCTGGAAGCTGGGCACCTTCGCGGCCCGAACCGCGATCAGGGGGAAGTCTAT
CTGCGGCAGGTGCATGGAGTCCGGCATGTCAACGCCCTGGCTCCCGACCAACGGCTGACACTCCACCGCGTC
GGTTTGACGATCATCTATGGCGACAACGGATCGGGAAAATCCGGCTACGCGCGGATTCTCAAGAAGGTATGT
CGCGCCCGTATGTCTGGCCGAGCCGAGGAAATCGCCCCCGACATCTATGACGCTGCGCCAGGCACGCCGAGC
GCCACTATTGAATACGCGATCAGCGGCCAGAACCGCACTTGCGCTTGGCAGCTTGGTCAGGCTGCCGACAAC
GCGCTTTCAGGCATCAGCGTGTTCGATTCCCGTACCGCGAACGTCCACGTGGACGATACGAATGACGTGGCT
TACACGCCGTTTCCGCTCAAGCTGCTAGGTGCGCTGGCGCAGCTCTGCAAGTCGGTCAAGGATAAGCTGGCA
GCCGAGATCGCGCAGATAAAGGCGCAAACGCCCGAAGCGATCAGGACCCCGGCATGCAGCCGGGACACAGCG
GTCGGCAAGCTCATGGCCCGAATCACCGCCAACACTGCGCCGGCGACGGTCGAAGCGTTGGCAGCGCTCACG
CAAGCAGAGCAAGACCGATTGGCGCAGCTCACGGCGGACCTGGCAGGTGATCCGGCTCGCGCGGCGCGTCAG
CTTGCGGCGATGAAGGCCAAGGTTGACGGGCACATTGCGCGCCTGGATCGGCTATTTGCTTCAATCAGCGAC
GATTCCGCCAATAACCTGCGCCGCCTTGCCGTTGATAGCGATGCCGCACGCCGGGCGGCAGAAGCTGCTTCC
AGTGCGCTTTTCCGCGACGAACCGTTGCCGCAGATTGGGTCGGAGGTTTGGCAGGCGCTATGGGCCAGTGCC
CGAGCGTTTTCTGACGCGGAAGCCTATCCCGAACGGCGATTCCCCGTCACAGACCCCGGCAGCGTATGCGTG
CTTTGCCAGCAGGAATTGACGCCCGTCGCCGCTGATCGGCTCAATCGCTTCGAGGCTTTTGTGCGCGACGAC
AGCCAGCAACGTGCCGACGCTGCGCGCGTCGCATACGACAGGGCGCTGGCAACGTTCAAGGGTGAGGCTGTT
TCGTTGGCCGAGCTGGCGAACATTGTGGCAACCGTCCGCGACGAACTGCGCCAGGATGCCTTGGCGATGGAG
ATCAGGGGCGCGACCCTTCGCGCCCTGTGGCGTCATCGCCAGATCAGGCGACGCCACGCAAATCCAAGCGCC
GCTATTGACGTGCCCGTTACGGAATATTCGCGTCAGGCACTGGTCGATCAAGCAGCGGGCATCGAGACTCGG
GCGAACGCCCTTGCCGCGGAGGCTGGCTCTCCAGCTCGCGCCGCCTTGCTTACCGAAAAGGCCGAGCTTGTG
GATCGGCAATGGCTTGGTGGCATCAAAGCCGATGTTCTCGCCGAAATCGAACGACAGAAGAAAATCGCACTG
CTTGAGACGGCCCAGCGGGACACTGCTACCAACCGCGTCACCACCAAGAGCACCGAGATCGCTCAGGCTTTG
GTGACGGACGCGCTACGCGCGCAATTTGCTCGCGAGGTGGCGAGCTTCGAGATTGCTGGCCTCGCTGTGGAG
CTTCGACAGCAAAACAGCGTTCAGGGCATCCCTCGCTTCAAGGTCGCACTTACACGGAAGCCCACGGCTGCG
GTGGGACAGGTTTTGAGCGAGGGCGAGCATCGCTGTGTTGCCTTGGCCGCGTTCATGGCCGAACTCGCCACC
ACCGAAAACAAGTCTGGCATCGTCTTTGACGATCCCGTTTCCTCGCTCGACCACATGCACCGGGAGGCCGTA
GCTAAACGCCTGGTTGCTGAGGCCGCTCATCGCCAGGTCATCGTCTTCACCCATGATCTTGCGTTTCTGTTC
GAGCTGAACCGCGCGGCTGACGATGCGCAGCCAAAGCCGCCGGTTGCGATTAGCTCCATCAGCCGAGGTGCT
GACAAGGCAGGCTTCTGCCGCAGCGAGCCGCCATTCAAAGCGCGTCGGGTCAGTGACATCACCACAAGTCTG
AGCAATCAGCTTGCCGGTGAACGCTACCATTTCGAGCAAGGCAATCAAGACGAGTGGCGAAAGTCCGTCAAA
TCCATCGCCGCGACGTTGCGCGATACGTGGGAGATCGCGGTTGAAGAAGCTGTCGGGCACGTCATCCGGCGG
CTGTCCAACGAAGTGAAGACGCCTGGCTTGGTCAAGCTGACCGCGATCACGGTTCCCGACTGCGAGGCCATG
CGTGACGGCTTTGGCCGCTGTTCCGAGCTGCTGCACAGCGCCGCCGCTGCGTTGAACCGCCCGCTGCCGAGG
CCAGAGACACTGACAGCGGAGATTGATACCTTGGCGGCCTGGGCGGACAGCCTTCGGCAGCGTCAGGGCGCT
GCGAGGTTGCCCTGA

Translation:

MTTEAEALANILAWSADSPGWQRDALRRLATQAALEPAEIDELASICKGDNPAVPLEAGHLRGPNRDQGEVY
LRQVHGVRHVNALAPDQRLTLHRVGLTIIYGDNGSGKSGYARILKKVCRARMSGRAEEIAPDIYDAAPGTPS
ATIEYAISGQNRTCAWQLGQAADNALSGISVFDSRTANVHVDDTNDVAYTPFPLKLLGALAQLCKSVKDKLA
AEIAQIKAQTPEAIRTPACSRDTAVGKLMARITANTAPATVEALAALTQAEQDRLAQLTADLAGDPARAARQ
LAAMKAKVDGHIARLDRLFASISDDSANNLRRLAVDSDAARRAAEAASSALFRDEPLPQIGSEVWQALWASA
RAFSDAEAYPERRFPVTDPGSVCVLCQQELTPVAADRLNRFEAFVRDDSQQRADAARVAYDRALATFKGEAV
SLAELANIVATVRDELRQDALAMEIRGATLRALWRHRQIRRRHANPSAAIDVPVTEYSRQALVDQAAGIETR
ANALAAEAGSPARAALLTEKAELVDRQWLGGIKADVLAEIERQKKIALLETAQRDTATNRVTTKSTEIAQAL
VTDALRAQFAREVASFEIAGLAVELRQQNSVQGIPRFKVALTRKPTAAVGQVLSEGEHRCVALAAFMAELAT
TENKSGIVFDDPVSSLDHMHREAVAKRLVAEAAHRQVIVFTHDLAFLFELNRAADDAQPKPPVAISSISRGA
DKAGFCRSEPPFKARRVSDITTSLSNQLAGERYHFEQGNQDEWRKSVKSIAATLRDTWEIAVEEAVGHVIRR
LSNEVKTPGLVKLTAITVPDCEAMRDGFGRCSELLHSAAAALNRPLPRPETLTAEIDTLAAWADSLRQRQGA
ARLP*

AnnotationID:6437 GeneID:6436

AnnotatorUID: danlee

Modification Date/Time: 2005-10-18 15:03:24

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|75674465|ref|YP_316886.1|  hypothetical protein Nwi_0267 [Nitrobacter winogradskyi Nb-255] 
     Length=872
     Score =  561 bits (1445),  Expect = 5e-158
     Identities = 326/867 (37%), Positives = 473/867 (54%), Gaps = 10/867 (1%)

gi|67919740|ref|ZP_00513305.1|  hypothetical protein ClimDRAFT_0757 [Chlorobium limicola DSM 
            245]
     Length=869
     Score =  442 bits (1136),  Expect = 3e-122
     Identities = 306/879 (34%), Positives = 445/879 (50%), Gaps = 43/879 (4%)

gi|62422823|ref|ZP_00378003.1|  COG0419: ATPase involved in DNA repair [Brevibacterium linens BL2]
     Length=855
     Score =  350 bits (897),  Expect = 2e-94
     Identities = 271/878 (30%), Positives = 415/878 (47%), Gaps = 55/878 (6%)

Structural Features:

COG4694, Uncharacterized protein conserved in bacteria [Function unknown].
             CD-Length = 758 residues, only  10.9% aligned
             Score = 58.2 bits (140), Expect = 4e-09

Genomic Context:

Comment:

ReferenceID:12682

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29977