ViewGene

Locus Name:
GeneID:
Location:

GeneID:6429
TrivialName: PA14_15750
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15750
PAO1 Ortholog Locus:
Sequence Length:279
Protein Length:92
Start: 1342467
Stop: 1342745
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAM04418.1| (AE010764) conserved hypothetical protein [Methanosarcina acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Sequence:
ATGGCGGGCGATGCGGACTCCAGCTCGTCGCCCGACCTTCTTCCCGAGGTTCGCCGGGTCTCTCCCGGCGAC
ACCTTGCGGCTCTGTACCTGCGGGGCTTCGGCTTCGCTTCCCGACTGTCCCGCCGACTGCCGCAACGGCCTG
ACGCTCCACGCGACCCGCGAGCGCCTGTTGCTGTTGTGCCGCTGCGGGCGCTCTGCCGACCTGCCGTATTGC
GACGGTAGCCATGCGCCTTCCGCCTCCGGGCTGAAGGCCAGGTGGCGGCGTTTCCGCGGCTGA
Translation:
MAGDADSSSSPDLLPEVRRVSPGDTLRLCTCGASASLPDCPADCRNGLTLHATRERLLLLCRCGRSADLPYC
DGSHAPSASGLKARWRRFRG*
AnnotationID:6430GeneID:6429
AnnotatorUID: diggins
Modification Date/Time: 2004-04-21 18:06:07
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12669
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29963
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:31795
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:6429_cdd.html
URL:
GC ORFID: 49431How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3611470Stop: 3611192
Length: 279
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGGGCGATGCGGACTCCAGCTCGTCGCCCGACCTTCTTCCCGAGGTTCGCCGGGTCTCTCCCGGCGAC
ACCTTGCGGCTCTGTACCTGCGGGGCTTCGGCTTCGCTTCCCGACTGTCCCGCCGACTGCCGCAACGGCCTG
ACGCTCCACGCGACCCGCGAGCGCCTGTTGCTGTTGTGCCGCTGCGGGCGCTCTGCCGACCTGCCGTATTGC
GACGGTAGCCATGCGCCTTCCGCCTCCGGGCTGAAGGCCAGGTGGCGGCGTTTCCGCGGCTGA