ViewGene
Locus Name:
GeneID:
Location:

GeneID:6423
TrivialName: PA14_16110
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_16110
PAO1 Ortholog Locus:
Sequence Length:285
Protein Length:94
Start: 1372594
Stop: 1372878
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAO55006.1| (AE016861) conserved domain protein [Pseudomonas syringae pv. tomato str. DC3000]
Identities = 30/83 (36%), Positives = 47/83 (56%)
Sequence:
TTGGACAGCCTGAAGCAACGACTGGCCGATGCCTTCGCTCCCCATCCCTTCACCCTCAGCCAGCCCCGGCCC
GATGGCGGACGGGTGGTCACGCTGGTCGATCCGCAGGGGGAAACCCTGTTGCAGCGGGTCATCGCCAAGGTG
CAGTTGAACGACGAAAGCTATCTCGAGGATGCCGTGCAGACCATTCGCCGGGAATTGCAGGTGCTGGTCGGG
CGGATGGAGGAAGACGTGCTGGCGACCTTCCGCGAGCGGGATCACGTGCTGCTGTATTCGTCGCGCTAG
Translation:
MDSLKQRLADAFAPHPFTLSQPRPDGGRVVTLVDPQGETLLQRVIAKVQLNDESYLEDAVQTIRRELQVLVG
RMEEDVLATFRERDHVLLYSSR*
AnnotationID:6424GeneID:6423
AnnotatorUID: diggins
Modification Date/Time: 2005-04-22 08:08:31
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16213




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29951




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49425How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3581343Stop: 3581059

          
Length: 285


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGGACAGCCTGAAGCAACGACTGGCCGATGCCTTCGCTCCCCATCCCTTCACCCTCAGCCAGCCCCGGCCC 
GATGGCGGACGGGTGGTCACGCTGGTCGATCCGCAGGGGGAAACCCTGTTGCAGCGGGTCATCGCCAAGGTG 
CAGTTGAACGACGAAAGCTATCTCGAGGATGCCGTGCAGACCATTCGCCGGGAATTGCAGGTGCTGGTCGGG 
CGGATGGAGGAAGACGTGCTGGCGACCTTCCGCGAGCGGGATCACGTGCTGCTGTATTCGTCGCGCTAG