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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAO54463.1| (AE016859) glutathione S-transferase [Pseudomonas syringae pv. tomato str. DC3000]
Identities = 134/201 (66%), Positives = 157/201 (78%), Gaps = 1/201 (0%)
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Sequence:
ATGAAACTGTACTACTCCCCCGGCTCTTGCTCGCTGGCCATCCACATCGTGCTTCGCGAGGCCAACGTGCCT
CACGAACTGGCCAAGGTCGACCTGTGGCAGCACAAGACCGCCTCGGGCGGCGATTACTTCCAGATCAACCCG
AAGGGCACGGCGCCCGCCCTCGAGTTCGAAGGCGGCTTGCTGACCGAAGGCGCCGCCATCAGCCAATACCTC
GCGGATCGCTACGCCCCAACGTTGGTGCCAGCCAACGGAACGCTGGAACGCAGCCGTTTGCACGAGATACTG
AATTACCTCTCTTCGGATTACCACAAGTCCTTCACCCCGCTGTTCTACCTGTCCCCTTCGGACGACCCCACG
GCCGCGCAGCGCCCAGTGATAGCCAAAGTGGCCTACCTGAACAACCTCCTCGCGGACGGCCGCCCATACATC
CTGGGTGACGAGTTCACCGTCGCGGACGCACATCTCTTCGCCCTTACGCGCTGGTGCCCCCAATTCGGCATT
TCGCTGGCCCCATTCCCAGCATTGATGGATTTCATGGCCAGGATTGCAGCCCGTCCGGCAGTCAGGGCCGCG
CTACAGGCCGAAGGACTGGAGGAACACCCCGACCAGTGCTGA |
Translation:
MKLYYSPGSCSLAIHIVLREANVPHELAKVDLWQHKTASGGDYFQINPKGTAPALEFEGGLLTEGAAISQYL
ADRYAPTLVPANGTLERSRLHEILNYLSSDYHKSFTPLFYLSPSDDPTAAQRPVIAKVAYLNNLLADGRPYI
LGDEFTVADAHLFALTRWCPQFGISLAPFPALMDFMARIAARPAVRAALQAEGLEEHPDQC* |
AnnotationID:6291 | GeneID:6290 |
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Modification Date/Time: |
2005-10-14 16:04:43 |
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GeneProduct: | putative glutathione S-transferase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO54463.1| (AE016859) glutathione S-transferase [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 206
Score = 269 bits (687), Expect = 9e-72
Identities = 134/201 (66%), Positives = 157/201 (78%), Gaps = 1/201 (0%)
>dbj|BAA12883.1| (D85853) glutathione S-transferase [Pseudomonas pseudoalcaligenes]
Length = 203
Score = 172 bits (437), Expect = 9e-43
Identities = 95/201 (47%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
>gb|AAM85534.1|AE013799_9 (AE013799) glutathionine S-transferase [Yersinia pestis KIM]
Length = 202
Score = 164 bits (415), Expect = 3e-40
Identities = 90/202 (44%), Positives = 131/202 (64%), Gaps = 4/202 (1%) |
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Structural Features: | COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].
CD-Length = 211 residues, 89.6% aligned
Score = 97.2 bits (241), Expect = 1e-21 |
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ReferenceID:32452 |
Author/Investigator(s): |
Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Daugherty S, Brinkac L, Beanan MJ, Haft DH, Nelson WC, Davidsen T, Zafar N, Zhou L, Liu J, Yuan Q, Khouri H, Fedorova N, Tran B, Russ |
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Title: |
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000 |
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Source: | Proc Natl Acad Sci U S A. 2003 Sep 2;100(18):10181-6. Epub 2003 Aug 19. |
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