putative protein associated with synthesis and assembly of refractile inclusion bodies
Cell Localization:
()
Synonyms:
rebB1
Cell Localization Confidence Code:
5
MolecularFunction:
Functional Category:
(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:
5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:
ACTIVE
Pathway:
Homology:
gi|32037874|ref|ZP_00136146.1| hypothetical protein Paer03000422 [Pseudomonas aeruginosa UCBPP-PA14]
gi|24461645|gb|AAN62214.1| putative protein associated with synthesis and assembly of refractile
inclusion bodies [Pseudomonas aeruginosa]
gi|24461634|gb|AAN62205.1| putative protein associated with synthesis and assembly of refractile
inclusion bodies [Pseudomonas aeruginosa]
Length=106
Score = 176 bits (446), Expect = 2e-43
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
gi|32037873|ref|ZP_00136145.1| hypothetical protein Paer03000421 [Pseudomonas aeruginosa UCBPP-PA14]
gi|24461646|gb|AAN62215.1| putative protein associated with synthesis and assembly of refractile
inclusion bodies [Pseudomonas aeruginosa]
gi|24461635|gb|AAN62206.1| putative protein associated with synthesis and assembly of refractile
inclusion bodies [Pseudomonas aeruginosa]
Length=106
Score = 159 bits (401), Expect = 3e-38
Identities = 93/104 (89%), Positives = 102/104 (98%), Gaps = 0/104 (0%)
gi|56680866|gb|AAV97531.1| R body protein RebB homolog [Silicibacter pomeroyi DSS-3]
Length=114
Score = 169 bits (427), Expect = 3e-41
Identities = 85/104 (81%), Positives = 97/104 (93%), Gaps = 0/104 (0%)
gi|34102033|gb|AAQ58400.1| probable RebB like protein [Chromobacterium violaceum ATCC 12472]
Length=106
Score = 157 bits (398), Expect = 7e-38
Identities = 78/104 (75%), Positives = 94/104 (90%), Gaps = 0/104 (0%)
gi|34102030|gb|AAQ58397.1| probable RebB like protein [Chromobacterium violaceum ATCC 12472]
Length=108
Score = 157 bits (396), Expect = 1e-37
Identities = 77/104 (74%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
The upstream gene (PA14_27640, GeneID 6176, similar to rebB2) is also a putative protein associated with
synthesis and assembly of refractile inclusion bodies. These 2 genes are 89% identical (93/104) to each other.
Comment:
Corresponds to rebB1 of P. aeruginosa strains SG17M and Clone C strain C.
ReferenceID:12210
Author/Investigator(s):
GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:
BLASTP
Data:
URL:
ReferenceID:29472
Author/Investigator(s):
GenNotator
Title:
CDD Search
PubMed:
MedLine:
Source:
Reference Type:
RPSBLAST
Data:
URL:
ReferenceID:38210
Author/Investigator(s):
Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T., Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B.
Title:
Gene Islands Integrated into tRNA(Gly) Genes Confer Genome Diversity on a Pseudomonas aeruginosa Clone.