ViewGene
Locus Name:
GeneID:
Location:

GeneID:6162
TrivialName: PA14_28240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28240
PAO1 Ortholog Locus:
Sequence Length:225
Protein Length:74
Start: 2443112
Stop: 2443336
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06160.1|AE004705_2 (AE004705) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Sequence:
ATGCGCGACGAAGACGACATCCACGAGCCCGAGCACGACCACCTGCTGGACAACGAATACCTGGAGGACGAG
TTCGACGCGGCGTCCGCCGAAGACTACGCCGATGGCGGCGAGGAGAGCGAAGCCGGGCCGGCCTGGCAACCC
TGCGCTTGCTGCGAGGACGTGCTGGTGGCGAGGGACGCGGACGGGCACTACGTTTGCGCGGAGTGCGCGGCG
CTCGACTGA
Translation:
MRDEDDIHEPEHDHLLDNEYLEDEFDAASAEDYADGGEESEAGPAWQPCACCEDVLVARDADGHYVCAECAA
LD*
AnnotationID:6163GeneID:6162
AnnotatorUID: diggins
Modification Date/Time: 2005-04-05 21:09:41
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:12183




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29441




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49164How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2510814Stop: 2510590

          
Length: 225


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCGCGACGAAGACGACATCCACGAGCCCGAGCACGACCACCTGCTGGACAACGAATACCTGGAGGACGAG 
TTCGACGCGGCGTCCGCCGAAGACTACGCCGATGGCGGCGAGGAGAGCGAAGCCGGGCCGGCCTGGCAACCC 
TGCGCTTGCTGCGAGGACGTGCTGGTGGCGAGGGACGCGGACGGGCACTACGTTTGCGCGGAGTGCGCGGCG 
CTCGACTGA