ViewGene

Locus Name:
GeneID:
Location:

GeneID:6160
TrivialName: PA14_28260
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28260
PAO1 Ortholog Locus:
Sequence Length:297
Protein Length:98
Start: 2444516
Stop: 2444812
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGGGTTTTATTCAATCTGGGTGAATGCGTGCAGGAAATCTACTCCGAAGAACAGATGCGCAAGGCGCTG
GGCCTTGCCGAAACACGACCGAAAAAGGCCCGGACCGAGGCTAGCCAGCCGGTCCGCTACACCATCGTCGAA
CTGAGCGTGCGCAAGGACGGGGCGGGATTGCCGCTGCGTTTCGAACATCGCTCGCGCTCCATCAGCAAGGTC
ACCGCGCAACTGGAGGCGGAGAAGGAAGCCAAGCGCCAGGGTTACCAGGTCTGGGCGCTGCTGGATATCCGG
CAGATCTGA
Translation:
MRVLFNLGECVQEIYSEEQMRKALGLAETRPKKARTEASQPVRYTIVELSVRKDGAGLPLRFEHRSRSISKV
TAQLEAEKEAKRQGYQVWALLDIRQI*
AnnotationID:6161GeneID:6160
AnnotatorUID: danlee
Modification Date/Time: 2006-03-27 17:05:33
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|84320513|ref|ZP_00968888.1|  hypothetical protein PaerC_01001763 [Pseudomonas aeruginosa C3719]
Length=79

 Score =  154 bits (390),  Expect = 7e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%), Gaps = 0/79 (0%)

gi|84327132|ref|ZP_00975156.1|  hypothetical protein Paer2_01001956 [Pseudomonas aeruginosa 2192]
Length=79

 Score =  150 bits (379),  Expect = 1e-35
 Identities = 77/79 (97%), Positives = 77/79 (97%), Gaps = 0/79 (0%)

Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15966
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29437
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49162How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2509410Stop: 2509114
Length: 297
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGGGTTTTATTCAATCTGGGTGAATGCGTGCAGGAAATCTACTCCGAAGAACAGATGCGCAAGGCGCTG
GGCCTTGCCGAAACACGACCGAAAAAGGCCCGGACCGAGGCTAGCCAGCCGGTCCGCTACACCATCGTCGAA
CTGAGCGTGCGCAAGGACGGGGCGGGATTGCCGCTGCGTTTCGAACATCGCTCGCGCTCCATCAGCAAGGTC
ACCGCGCAACTGGAGGCGGAGAAGGAAGCCAAGCGCCAGGGTTACCAGGTCTGGGCGCTGCTGGATATCCGG
CAGATCTGA