ViewGene
Locus Name:
GeneID:
Location:

GeneID:6153
TrivialName: PA14_28520
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28520
PAO1 Ortholog Locus:
Sequence Length:426
Protein Length:141
Start: 2459780
Stop: 2460205
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN66426.1|AE016270_3 (AE016777) hypothetical protein [Pseudomonas putida KT2440]
Identities = 42/96 (43%), Positives = 57/96 (59%)
Sequence:
TTGCTGCGAGGTGTAACTGCCGCCTCATCGCCCCCGGGGCCTTTAGTTGCCGCTGTGGTCCCGGGGGCTTCT
CTTTTCCTGCCTGTTTCCGGCGATGCGAGGTGCGCAATGTCGAGGGTGGTTGCGGGATCGCTGGTCTGCCTG
CTGCTCGGTTCGGCGCCGGCCTGGGCTTCCACGGCCGAGGCGTGGCAGGCGCACGACGCCATGGTGCGTGCC
GCCTGCCTGAAAGCCAGCGGCTTGCGCCAGGTACGCGCGGTGGGGCAGGTACTGCCCTTCGACGATGAGGTG
GGCTATTCGGCGCTGCTCCTGCAGGGCCGCTATCCGCAGCCGCACATGCAGGGCCGCCAGGGCCGCGAGCTG
TGTCTGTACCGGCGCGCCACCGGCAAGGCCAGCGTCAGCGAGGCCGACGCCCTGCTCAAGCCTTGA
Translation:
MLRGVTAASSPPGPLVAAVVPGASLFLPVSGDARCAMSRVVAGSLVCLLLGSAPAWASTAEAWQAHDAMVRA
ACLKASGLRQVRAVGQVLPFDDEVGYSALLLQGRYPQPHMQGRQGRELCLYRRATGKASVSEADALLKP*
AnnotationID:6154GeneID:6153
AnnotatorUID: diggins
Modification Date/Time: 2005-04-05 10:10:39
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15962




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29425




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49155How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2494146Stop: 2493721

          
Length: 426


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCTGCGAGGTGTAACTGCCGCCTCATCGCCCCCGGGGCCTTTAGTTGCCGCTGTGGTCCCGGGGGCTTCT 
CTTTTCCTGCCTGTTTCCGGCGATGCGAGGTGCGCAATGTCGAGGGTGGTTGCGGGATCGCTGGTCTGCCTG 
CTGCTCGGTTCGGCGCCGGCCTGGGCTTCCACGGCCGAGGCGTGGCAGGCGCACGACGCCATGGTGCGTGCC 
GCCTGCCTGAAAGCCAGCGGCTTGCGCCAGGTACGCGCGGTGGGGCAGGTACTGCCCTTCGACGATGAGGTG 
GGCTATTCGGCGCTGCTCCTGCAGGGCCGCTATCCGCAGCCGCACATGCAGGGCCGCCAGGGCCGCGAGCTG 
TGTCTGTACCGGCGCGCCACCGGCAAGGCCAGCGTCAGCGAGGCCGACGCCCTGCTCAAGCCTTGA