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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: emb|CAD61154.1| (AJ536756) putative mating pair formation protein [Ralstonia oxalatica]
Identities = 199/239 (83%), Positives = 215/239 (89%), Gaps = 4/239 (1%)
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Sequence:
ATGAAGAAGCGCCTTGTCGCCGCTGCCATCGCGGCCATGCTTTGCACCGCCACCGCCCATGCGCAATGGGTC
GTGATCGACCCCACGAACCTCGTGCAGAACACGCTGACCGCGATCCGCACGCTGGAACAGATCAACAACCAA
ATCCAGCAGCTTCAGAACGAAGCGCAGATGCTGATGAATCAGGCGCGCAACCTCGCCAGCCTGCCGTCCAGC
GTCGTCGGCCAGTTGCGCGCCAACCTGGCGACCACCGAGCGGCTGATCGCCCAAGCGCGCGGCTTGGCCTAC
GACGTGACGAATCTGGATCGGGAGTTCGCGCGCCTGTACCCGGAGCAGTACGCCGCCACCGTCAGCGGCGAC
CAGATGTACCGCGACGCCCAAGAGCGGTGGAAGAACACGCTCAACGGCTTGCAGACCACCATGCAGATGCAG
GCGCAGGTGTCGCAGAACCTGGGCGAAGACGAAAGCGTGCTGGCCGATCTGGTCGGCAAGAGCCAGTCAGCG
CAAGGCGCGCTGCAAGCGATGCAGGCCATGAACCAGTTGCTCGCCTTGCAGGCCAAGCAGTCGATCCAGTCG
CAGCGGCTCCAGATCACGCAAGACCGGGCCGCCTCGCTGGAACTGGCGCGGCAGGCGGCGGCCACCGAGCGC
GCCCGCGAAGTGCGGCGGCGCTTCCTCGGGGAAGGCACGCCGTACACGCCGCAGTCCGTCAACTTCTACCGC
GACTGA |
Translation:
MKKRLVAAAIAAMLCTATAHAQWVVIDPTNLVQNTLTAIRTLEQINNQIQQLQNEAQMLMNQARNLASLPSS
VVGQLRANLATTERLIAQARGLAYDVTNLDREFARLYPEQYAATVSGDQMYRDAQERWKNTLNGLQTTMQMQ
AQVSQNLGEDESVLADLVGKSQSAQGALQAMQAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATER
AREVRRRFLGEGTPYTPQSVNFYRD* |
AnnotationID:6100 | GeneID:6099 |
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Modification Date/Time: |
2005-09-30 12:12:04 |
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GeneProduct: | TrbJ-like protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (22) Related to phage, transposon, or plasmid |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | gi|68527813|gb|EAN50779.1| probable conjugal transfer trbJ signal peptide protein [Ralstonia metallidurans CH34]
Length=241
Score = 433 bits (1114), Expect = 2e-120
Identities = 226/239 (94%), Positives = 231/239 (96%), Gaps = 0/239 (0%)
gi|27817727|emb|CAD61154.1| putative mating pair formation protein [Cupriavidus oxalaticus]
Length=251
Score = 379 bits (974), Expect = 3e-104
Identities = 199/239 (83%), Positives = 215/239 (89%), Gaps = 4/239 (1%)
gi|17547299|ref|NP_520701.1| PROBABLE CONJUGAL TRANSFER TRBJ SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum GMI1000]
Length=245
Score = 352 bits (902), Expect = 8e-96
Identities = 184/245 (75%), Positives = 209/245 (85%), Gaps = 4/245 (1%)
gi|67088811|gb|EAM08277.1| probable conjugal transfer trbJ signal peptide protein [Azotobacter vinelandii AvOP]
Length=245
Score = 350 bits (899), Expect = 2e-95
Identities = 183/234 (78%), Positives = 207/234 (88%), Gaps = 0/234 (0%) |
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Structural Features: | COG5314, Conjugal transfer/entry exclusion protein [Intracellular trafficking and secretion].
CD-Length = 252 residues, 85.7% aligned
Score = 137 bits (346), Expect = 1e-33 |
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