ViewGene

Locus Name:
GeneID:
Location:

GeneID:6091
TrivialName: PA14_30980
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30980
PAO1 Ortholog Locus:
Sequence Length:306
Protein Length:101
Start: 2692432
Stop: 2692127
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGAAACTGCGTTCGTCTCTCATGATTGCTTTTGCCGCCACCGCACTGCTGACCGGCACCGCCTTCGCTCAT
GACCCGGCACTACACAGCAAGGAAGATGAAGCCAAGGCCAAGCCCGCCACCTGCCAACAACTCAACGACCCG
GAACACTACGAAATCGACTTGAAGGATGATTCCACCCGGTCGCTGAAGGCGCGTTGCGATGCCCGCAAGAAG
GCGCAAGAGCAGACGGCTGCCCCGGCGCAGAAGAAGCCGGCTACAACGCCGGCTCCGGCACCCCGTCAATCG
TCCGACGGCAAGAGCTGA
Translation:
MKLRSSLMIAFAATALLTGTAFAHDPALHSKEDEAKAKPATCQQLNDPEHYEIDLKDDSTRSLKARCDARKK
AQEQTAAPAQKKPATTPAPAPRQSSDGKS*
AnnotationID:6092GeneID:6091
AnnotatorUID: danlee
Modification Date/Time: 2005-09-30 14:02:49
Gene Name:
Confidence Code:4
GeneProduct:hypothetical
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|71066149|ref|YP_264876.1|  hypothetical protein Psyc_1594 [Psychrobacter arcticum 273-4]
     Length=100
     Score = 41.6 bits (96),  Expect = 0.007
     Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Structural Features:
Genomic Context:
Comment:
ReferenceID:12060
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29302
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49093How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2261494Stop: 2261799
Length: 306
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAAACTGCGTTCGTCTCTCATGATTGCTTTTGCCGCCACCGCACTGCTGACCGGCACCGCCTTCGCTCAT
GACCCGGCACTACACAGCAAGGAAGATGAAGCCAAGGCCAAGCCCGCCACCTGCCAACAACTCAACGACCCG
GAACACTACGAAATCGACTTGAAGGATGATTCCACCCGGTCGCTGAAGGCGCGTTGCGATGCCCGCAAGAAG
GCGCAAGAGCAGACGGCTGCCCCGGCGCAGAAGAAGCCGGCTACAACGCCGGCTCCGGCACCCCGTCAATCG
TCCGACGGCAAGAGCTGA