ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6085

TrivialName: PA14_31060

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_31060

PAO1 Ortholog Locus:

Sequence Length: 618

Protein Length: 205

Start: 2701278

Stop: 2700661

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAP08695.1| (AE017003) Transcriptional regulator, MecI family [Bacillus cereus ATCC 14579] Identities = 27/119 (22%), Positives = 59/119 (49%)

Sequence:

GTGGAAGCCGGTGATCGAGCAGCGGCTGGGGCAGCAGCTTGCGGCAACCGTGCGCGGTGGCGGGGTGTCCTG
GGAGATTGGGCGGCAACGCGGGCCTACTGTCGCTTGATTGCCCGCAAGAGCGAGGCGGAGTGCCGGCATGGC
ACAATAAACCGATTGACGGTCGGTTTTTTCTGGACGATACTCATTAGTTCGAGTCAAAGCTCGGAGCTGACA
ACCTTGACCAACCACAGCGTACCAACACTTGGCGATCTGGAAATCGCCGTGCTTGAAGACATCTGGCGCTTC
GGCCCGTCCGACACCAAGGCGGTTTATTCCCGCATTGGACAGTCGCGCTCGATTTCTTTGAACACCGTGCAA
TCTACGCTGGAACGTCTATTTCGCAAGGCCATGCTCCAACGCGAAAAGATCAGCCACGCCTACGAATACTCA
GCGCGAGTTTCCCGCCGAGAATTGATCCAGAAACTGGTGGAATCCACGGTGCGTCGTGTTGCAGGCCCGCAG
CCCGATGCGTTGCTGAGCGCATTTGTCGATCTTGCTGCAAGGGCGGATGACGACCAGCTCAAGAGGTTGGAG
GAATTGATCGCACGTCGTCGGGCTGAATTGGATCAGCCGTGA

Translation:

MEAGDRAAAGAAACGNRARWRGVLGDWAATRAYCRLIARKSEAECRHGTINRLTVGFFWTILISSSQSSELT
TLTNHSVPTLGDLEIAVLEDIWRFGPSDTKAVYSRIGQSRSISLNTVQSTLERLFRKAMLQREKISHAYEYS
ARVSRRELIQKLVESTVRRVAGPQPDALLSAFVDLAARADDDQLKRLEELIARRRAELDQP*

AnnotationID:6086 GeneID:6085

AnnotatorUID: danlee

Modification Date/Time: 2005-09-30 16:04:25

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|69164963|gb|EAN74001.1|  possible regulator [Shewanella frigidimarina NCIMB 400]
     Length=127
     Score = 91.3 bits (225),  Expect = 2e-17
     Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 0/118 (0%)

gi|67859003|gb|EAM54091.1|  similar to transcriptional regulator [Solibacter usitatus Ellin6076]
     Length=137
     Score = 73.6 bits (179),  Expect = 4e-12
     Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

gi|76166879|gb|EAO61003.1|  Penicillinase repressor [Chloroflexus aurantiacus J-10-fl]
     Length=141
     Score = 72.0 bits (175),  Expect = 1e-11
     Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 0/120 (0%)

Structural Features:

COG3682, Predicted transcriptional regulator [Transcription].
             CD-Length = 123 residues,  79.7% aligned
             Score = 64.1 bits (156), Expect = 1e-11

pfam03965, Pencillinase_R, Penicillinase repressor.
             CD-Length = 122 residues,  82.0% aligned
             Score = 45.4 bits (107), Expect = 5e-06

Genomic Context:

Comment:

ReferenceID:15918

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29290