ViewGene
Locus Name:
GeneID:
Location:

GeneID:6072
TrivialName: PA14_31220
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_31220
PAO1 Ortholog Locus:
Sequence Length:279
Protein Length:92
Start: 2714903
Stop: 2714625
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
ref|ZP_00025467.1| hypothetical protein [Ralstonia metallidurans] Length = 92; Score = 154 bits (388), Expect = 4e-37 Identities = 72/92 (78%), Positives = 81/92 (88%)
Sequence:
ATGAGCAGCCATCACGACTACATCATCGAAATCACCGCGCAACACGATGCGCTCAAGCCATTCGCGCCGGAG
AACGGCCAGCCGCTGCGCTTCAAGATCGGCGATGCGGTGATCTACACCAACGAATACGGCGTGCAGTTCCGT
CGCTGCGTCACCGGGTTCTACCGGCCGAGTGGCCTTTGCGGTCACTACGCGCGTGGAGCGCGCTATCTGCTG
AACTCGACTTCGCCGTGGGTGCCGGTTGCGGAATCCAGCCTGCGTCCTGACGACTCGGCCTGA
Translation:
MSSHHDYIIEITAQHDALKPFAPENGQPLRFKIGDAVIYTNEYGVQFRRCVTGFYRPSGLCGHYARGARYLL
NSTSPWVPVAESSLRPDDSA*
AnnotationID:6073GeneID:6072
AnnotatorUID: danlee
Modification Date/Time: 2005-09-30 17:05:51
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|68525987|gb|EAN48962.1|  hypothetical protein RmetDRAFT_0540 [Ralstonia metallidurans CH34]
     Length=92
     Score =  154 bits (388),  Expect = 1e-36
     Identities = 72/92 (78%), Positives = 81/92 (88%), Gaps = 0/92 (0%)

gi|58616414|ref|YP_195544.1|  hypothetical protein p1B366 [Azoarcus sp. EbN1]
     Length=95
     Score =  108 bits (271),  Expect = 4e-23
     Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 0/91 (0%)






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:12025




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29265




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49074How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2239023Stop: 2239301

          
Length: 279


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGAGCAGCCATCACGACTACATCATCGAAATCACCGCGCAACACGATGCGCTCAAGCCATTCGCGCCGGAG 
AACGGCCAGCCGCTGCGCTTCAAGATCGGCGATGCGGTGATCTACACCAACGAATACGGCGTGCAGTTCCGT 
CGCTGCGTCACCGGGTTCTACCGGCCGAGTGGCCTTTGCGGTCACTACGCGCGTGGAGCGCGCTATCTGCTG 
AACTCGACTTCGCCGTGGGTGCCGGTTGCGGAATCCAGCCTGCGTCCTGACGACTCGGCCTGA