ViewGene
Locus Name:
GeneID:
Location:

GeneID:6063
TrivialName: PA14_31340
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_31340
PAO1 Ortholog Locus:
Sequence Length:357
Protein Length:118
Start: 2725301
Stop: 2725657
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06151.1|AE004704_5 (AE004704) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 34/69 (49%), Positives = 43/69 (62%)
Sequence:
ATGGGGGTTGATCGCGGTCATGCCGGTAGGGCCTTCGACGCCGACGCCAGCTCTGCGAAACCGATTACCTGC
CAATCGGACGTTTCCTATATCGACCGGCACCACCGCTCGCTAAAACGGTCGCACATGCTTCCACCGAGAAAA
GACATGTCCGATACGTTCTCCTTCGCCTCGCGCCTCTGCAAGTTCGTCATCCTTCTCGTCATCCTGCTGATC
GGCGGAGCCAGCCTCTACCTGTGGTGGCTGGGGCGGCCTTACCAGGACGCCATGTCCGCCTTCGTCCCGTTG
CTCATGCCGATGCTCGTGCTGGTGCTGGCGTTCGATACGTTCCGGGCCCTCGCCCGAACGAGGCGCTAG
Translation:
MGVDRGHAGRAFDADASSAKPITCQSDVSYIDRHHRSLKRSHMLPPRKDMSDTFSFASRLCKFVILLVILLI
GGASLYLWWLGRPYQDAMSAFVPLLMPMLVLVLAFDTFRALARTRR*
AnnotationID:6064GeneID:6063
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 06:06:15
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.








   
Genomic Context:






   
Comment:


















    ReferenceID:12009




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29247




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49065How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2228625Stop: 2228269

          
Length: 357


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGGGGTTGATCGCGGTCATGCCGGTAGGGCCTTCGACGCCGACGCCAGCTCTGCGAAACCGATTACCTGC 
CAATCGGACGTTTCCTATATCGACCGGCACCACCGCTCGCTAAAACGGTCGCACATGCTTCCACCGAGAAAA 
GACATGTCCGATACGTTCTCCTTCGCCTCGCGCCTCTGCAAGTTCGTCATCCTTCTCGTCATCCTGCTGATC 
GGCGGAGCCAGCCTCTACCTGTGGTGGCTGGGGCGGCCTTACCAGGACGCCATGTCCGCCTTCGTCCCGTTG 
CTCATGCCGATGCTCGTGCTGGTGCTGGCGTTCGATACGTTCCGGGCCCTCGCCCGAACGAGGCGCTAG