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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05954.1|AE004684_9 (AE004684) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 344/345 (99%), Positives = 344/345 (99%)
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Sequence:
ATGTACGTCGCCTTCGAGCAATTCTTCCTCGAAGATCTGAAACGACCGCAGCGCTCGCTGCTGCGGCCGGAA
GTGATGTTCCAGCTCGACCGGGTCGACCGTTTCGATTTCCCCCGCCAGGAACTGCAGACCCGCAGCGGCAGG
CGCCATGGCTACGACTACCTGGTGATCGCCACGGGTTGCGTGCCGGCTCCGGAACGTATCGAGGGGCTGAAA
GAGGCTGGCGACCATTTCTACCAGTACCAGCCGGCCCGTCGGTTGGCCGAGCGGCTGGCGAGCCTGGAGTCG
GGGCGGGTATTCATCACGGTGAGCTTCCCGAGGACGCCGAATGTGCCCCACCAGTGCGGGATCGCGCCTGTG
GAGACGACCCTGATGCTCGACGACTACTTGCGCCGCCGGGGTGTCCGCGAACGTGTCGAGATCGTCTACACC
TATCCCACCACGGCCCAGTTGCTGCGCAACTGTCTGTTCCTGCAACGACCGACCTGCGAAATCCTGCCGAGC
CTGTTCGAGCAACGCGGCATCCGTTTCCAGCGTGGTTTTACCCTGGCCAGGGTCGACCCGGAGCGGCGCATC
GCCTATTCGGAGGAGGGCGACGAGCAGCCGTTCGACTTGCTCATGGCGACACCGCCGATCCACGCCGTGGAT
GCGGTCAGGGAGTGCGGCCTGTCCCAGGCCGCCGCCGACGAAGGCTGGTTGCCGACGAACCATGAAACCTTG
CAGGTGTATGGCGTCGACCGGGTGTATACCCTGGGCGATACCGTCGATCTGCCGGTGAGCAAGGCCGGTGGG
GCCTGTCACAACCAGGCGCCGGTAGTCGCCAGCAACATCGCTGCCGAGATTCGTCTCGGTAAGCCCTGCGCG
ATCTACGATGGACGAGTCCAGGCTGTCGCGCAGATGGGCCTGAACGCCGGAATGCCGCTCTGGTACGACTAT
CGGCACGACGTAAAGCCGACCCCGCCGACCAAGCTTGGCGGGTTGTTGCGCCAGGGTTTCAATCGCGGCCTG
TACTGGGCCGTAGCCCGTGGAATGCTTTGA |
Translation:
MYVAFEQFFLEDLKRPQRSLLRPEVMFQLDRVDRFDFPRQELQTRSGRRHGYDYLVIATGCVPAPERIEGLK
EAGDHFYQYQPARRLAERLASLESGRVFITVSFPRTPNVPHQCGIAPVETTLMLDDYLRRRGVRERVEIVYT
YPTTAQLLRNCLFLQRPTCEILPSLFEQRGIRFQRGFTLARVDPERRIAYSEEGDEQPFDLLMATPPIHAVD
AVRECGLSQAAADEGWLPTNHETLQVYGVDRVYTLGDTVDLPVSKAGGACHNQAPVVASNIAAEIRLGKPCA
IYDGRVQAVAQMGLNAGMPLWYDYRHDVKPTPPTKLGGLLRQGFNRGLYWAVARGML* |
AnnotationID:6063 | GeneID:6062 |
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Modification Date/Time: |
2006-02-07 18:06:08 |
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GeneProduct: | conserved hypothetical protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (14) Hypothetical, unclassified, unknown |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | putative enzyme |
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Homology: | gi|9948626|gb|AAG05954.1| conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|15597762|ref|NP_251256.1| hypothetical protein PA2566 [Pseudomonas aeruginosa PAO1]
Length=395
Score = 706 bits (1821), Expect = 0.0
Identities = 344/345 (99%), Positives = 344/345 (99%), Gaps = 0/345 (0%)
gi|84326894|ref|ZP_00974918.1| COG0446: Uncharacterized NAD(FAD)-dependent dehydrogenases [Pseudomonas
aeruginosa 2192]
Length=381
Score = 705 bits (1819), Expect = 0.0
Identities = 344/345 (99%), Positives = 344/345 (99%), Gaps = 0/345 (0%)
gi|37955736|gb|AAP22575.1| putative flavoprotein reductase [Pseudomonas aeruginosa]
Length=395
Score = 668 bits (1724), Expect = 0.0
Identities = 321/345 (93%), Positives = 335/345 (97%), Gaps = 0/345 (0%)
gi|68343007|gb|AAY90613.1| oxidoreductase, pyridine nucleotide-disulphide family [Pseudomonas
fluorescens Pf-5]
gi|70728708|ref|YP_258457.1| oxidoreductase, pyridine nucleotide-disulphide family [Pseudomonas
fluorescens Pf-5]
Length=396
Score = 591 bits (1523), Expect = 2e-167
Identities = 282/345 (81%), Positives = 312/345 (90%), Gaps = 0/345 (0%) |
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Structural Features: | COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases
CD-Length = 415 residues, 72.3% aligned
Score = 97.8 bits (242), Expect = 2e-21
Identities = 71/327 (21%), Positives = 101/327 (30%), Gaps = 43/327 (13%)
COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
CD-Length = 405 residues, 79.8% aligned
Score = 78.7 bits (194), Expect = 8e-16
Identities = 80/342 (23%), Positives = 112/342 (32%), Gaps = 53/342 (15%) |
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Comment: | Confirmed frame-shift results in truncation of first 50 aa of PAO1 PA2566. |
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