ViewGene

Locus Name:
GeneID:
Location:

GeneID:6018
TrivialName: PA14_32810
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32810
PAO1 Ortholog Locus:
Sequence Length:312
Protein Length:103
Start: 2865179
Stop: 2865490
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05850.1|AE004673_10 (AE004673) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 81/89 (91%), Positives = 85/89 (95%)
Sequence:
TTGACCCAGGCTTACGAGGATGCCGGCTGGCAAGGTTCGGTCACAGCTGGTGTCGAGGGCGGTAGGTTCGCT
GCGGAACTTGTTGGCGTTCTGACGGCAGTAAAAGGTGGCGCGCAGATAACCGCCAAGCTGCCAACAGCAGCC
AAGAACCTGGTCAACGCGATTGCGGAGTCACCTGTTTCCGGTAGTATGAGTTCGCAGCTCGGGGCAGTGGGG
GACTTGGGTCGGCTGGGTGGGGGGCAAAAGGAGTTCAAAAACTTCCTGAACTCGGTGGGGTTGATACGTTTC
TTAGCTCTCAAGCAGCAAATTTAA
Translation:
MTQAYEDAGWQGSVTAGVEGGRFAAELVGVLTAVKGGAQITAKLPTAAKNLVNAIAESPVSGSMSSQLGAVG
DLGRLGGGQKEFKNFLNSVGLIRFLALKQQI*
AnnotationID:6019GeneID:6018
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 16:04:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15867
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29157
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:6018

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7940 PA2462_tr translation of PA2462 5634 1.50 1.56 5538 401.0
198036 gb|AAG05850.1|AE004673_10 (AE004673) hypothetical protein PA2462 [Pseudomonas aeruginosa PAO1] 5634 1.50 1.56 5538 401.0
GC ORFID: 49020How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2088745Stop: 2088434
Length: 312
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: t_PA2462 translation of PA2462Homolog Bit Score 159.0
Other Homologs: t_PA2462 translation of PA2462 (BLASTP 159)
GC ORF Sequence
TTGACCCAGGCTTACGAGGATGCCGGCTGGCAAGGTTCGGTCACAGCTGGTGTCGAGGGCGGTAGGTTCGCT
GCGGAACTTGTTGGCGTTCTGACGGCAGTAAAAGGTGGCGCGCAGATAACCGCCAAGCTGCCAACAGCAGCC
AAGAACCTGGTCAACGCGATTGCGGAGTCACCTGTTTCCGGTAGTATGAGTTCGCAGCTCGGGGCAGTGGGG
GACTTGGGTCGGCTGGGTGGGGGGCAAAAGGAGTTCAAAAACTTCCTGAACTCGGTGGGGTTGATACGTTTC
TTAGCTCTCAAGCAGCAAATTTAA