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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03496.1|AE004449_5 (AE004449) cytochrome c oxidase, subunit I [Pseudomonas aeruginosa PAO1]
Identities = 530/530 (100%), Positives = 530/530 (100%)
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Sequence:
ATGAGTGCTGTGATCGATACGCCCGACCACCATGCCGGCGACCACCACCACGGACCGGCCAAGGGCCTGATG
CGCTGGGTGCTGACGACCAACCACAAGGACATCGGCACCCTCTACCTGTGGTTCAGCTTCATGATGTTCCTG
CTCGGCGGCTCGATGGCCATGGTGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAGATCGTCGAGCCGGCG
TTCTTCAACCAGATGACCACCATGCACGGCCTGATCATGGTCTTCGGCGCGGTGATGCCGGCCTTCGTCGGC
CTGGCCAACTGGATGATCCCGCTGATGATCGGCGCGCCGGACATGGCCCTGCCGCGGATGAACAACTTCAGC
TTCTGGCTGCTGCCGGCGGCCTTCGGCCTGCTGGTCAGCACCCTGTTCATGCCCGGCGGCGGTCCCAACTTC
GGCTGGACCTTCTACGCGCCGCTGTCGACCACCTTCGCCCCGCACAGCGTGACCTTCTTCATCTTCGCCATC
CACCTGGCCGGGATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCTCAACCTGCGCGCCCCG
GGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGTTGATCGCGGTG
ATGCCGGTGCTGGCCGGCGTGGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGCGCC
GCCGGCGGCGGCGACCCGGTGCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATG
ATCCTGCCCGCCTTCGGTGCGGTCAGTGCGATCATCCCGACCTTCGCGCGCAAGCCGCTGTTCGGCTACACC
TCGATGGTCTACGCCACCGCCAGCATCGCCTTCCTCTCCTTCGTGGTCTGGGCGCACCACATGTTCGTGGTC
GGCATCCCGGTCACCGGCGAGCTGTTCTTCATGTACGCCACCATGCTGATCGCGGTGCCCACCGGGGTGAAG
GTGTTCAACTGGGTGACCACCATGTGGGAGGGTTCGCTGACCTTCGAGACGCCGATGCTGTTCGCCGTGGCC
TTCGTCATCCTGTTCACCATCGGCGGCTTCTCCGGACTGATGCTGGCGATCGCCCCGGCGGACTTCCAGTAC
CACGACACCTACTTCGTGGTCGCCCACTTCCACTACGTGCTGGTGCCCGGCGCGATCTTCGGCATCTTCGCC
TCGGCCTACTACTGGCTGCCGAAGTGGACCGGCCACATGTACGACGAGACCCTCGGCAAGCTGCACTTCTGG
ATGAGCTTCATCGGCATGAACCTGGCGTTCTTCCCGATGCACTTCGTCGGCCTCGCCGGCATGCCGCGACGG
ATCCCCGACTACAACCTGCAGTTCGCCGACTTCAACATGGTCTCGTCGATCGGCGCCTTCATGTTCGGCACC
ACCCAGCTGCTGTTCCTGTTCATCGTCATCAAGTGCATCCGCGGCGGCAAGCCGGCCCCTGCCAAGCCCTGG
GACGGCGCCGAGGGCCTGGAGTGGAGCATCCCTTCGCCGGCGCCCTACCACACCTTCAGCACCCCGCCCGAG
GTCAAGTGA |
Translation:
MSAVIDTPDHHAGDHHHGPAKGLMRWVLTTNHKDIGTLYLWFSFMMFLLGGSMAMVIRAELFQPGLQIVEPA
FFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMPGGGPNF
GWTFYAPLSTTFAPHSVTFFIFAIHLAGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAV
MPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSAIIPTFARKPLFGYT
SMVYATASIAFLSFVVWAHHMFVVGIPVTGELFFMYATMLIAVPTGVKVFNWVTTMWEGSLTFETPMLFAVA
FVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFW
MSFIGMNLAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGTTQLLFLFIVIKCIRGGKPAPAKPW
DGAEGLEWSIPSPAPYHTFSTPPEVK* |
AnnotationID:610 | GeneID:601 |
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Modification Date/Time: |
2005-03-22 18:06:50 |
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GeneProduct: | cytochrome c oxidase, subunit I |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN65738.1|AE016200_2 (AE016774) cytochrome c oxidase, subunit I [Pseudomonas putida
KT2440]
Length = 529
Score = 1039 bits (2686), Expect = 0.0
Identities = 500/531 (94%), Positives = 513/531 (96%), Gaps = 3/531 (0%)
>gb|AAN57567.1|AE015892_7 (AE015892) cytochrome c oxidase, subunit I [Shewanella oneidensis
MR-1]
Length = 530
Score = 907 bits (2344), Expect = 0.0
Identities = 417/517 (80%), Positives = 467/517 (90%)
>gb|AAO07513.1|AE016810_16 (AE016810) Heme/copper-type cytochrome/quinol oxidase, subunit 1
[Vibrio vulnificus CMCP6]
Length = 543
Score = 867 bits (2239), Expect = 0.0
Identities = 401/528 (75%), Positives = 457/528 (86%), Gaps = 4/528 (0%) |
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Structural Features: | COG0843, CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1
[Energy production and conversion]
CD-Length = 566 residues, 90.6% aligned
Score = 545 bits (1405), Expect = 5e-156
Identities = 284/514 (55%), Positives = 365/514 (71%), Gaps = 6/514 (1%)
pfam00115, COX1, Cytochrome C and Quinol oxidase polypeptide I.
CD-Length = 458 residues, 99.8% aligned
Score = 485 bits (1251), Expect = 5e-138
Identities = 272/458 (59%), Positives = 339/458 (74%), Gaps = 6/458 (1%) |
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