ViewGene

Locus Name:
GeneID:
Location:

GeneID:5998
TrivialName: PA14_33360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_33360
PAO1 Ortholog Locus:
Sequence Length:1395
Protein Length:464
Start: 2935897
Stop: 2937291
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCCGAGGTGGGTTCGAGTTTCTTAGCTGCCTACACGGCAGTGAACTGGATTCATGTATCAGGCATCGTA
CTCGGCAATTTCTTAGCTGCCTACACGGCAGTGAACCAGGTAGACGCGGACATCAAGCCCGCCGTGAATTTC
TTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTAC
ACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAAC
AACCGCGCGCAACAGCTGTGCATCGTCACCTTTTTCTTAGCTGCCTACACGGCAGTGAACCGTCTCGATGCT
GCCGTCGATGAGCGTCTTGTTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCT
GTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTC
TTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGCGCACTTTCTTAGCTGCCTAC
ACGGCAGTGAACAACAGAACCGCGCACCTCGATCAGCCTCGCATTTTCTTAGCTGCCTACACGGCAGTGAAC
GTAAATCCAGCGCCTGGGCTGCGCATTGTCCATTTCTTAGCTGCCTACACGGCAGTGAACCACGCAGCCAGG
CTCGAACATCGGCCCGGCTTTTTCTTAGCTGCCTACACGGCAGTGAACTACTACGACGACGCTTTGCAGGCT
GATATTCATTTCTTAGCTGCCTACACGGCAGTGAACACGACGCGACCAGAATCGCGATTTGCACCCACTTTC
TTAGCTGCCTACACGGCAGTGAACGCGCTGACGCCGCATTCGGCGATCTGCTTCGTTTTCTTAGCTGCCTAC
ACGGCAGTGAACCGGGCGCTTGCGCCGGATCGGCGAATTGGATGTTTCTTAGCTGCCTACACGGCAGTGAAC
CCGGGCTGGATGGACTCGAAGGGCGCCAGGCTTTTCTTAGCTGCCTACACGGCAGTGAACGACCAGATCCTG
CCGCAGTACTGGCAGGACCGTTTCTTAGCTGCCTACACGGCAGTGAACGTCGCAGCCACTGTGTCGGCCAAA
ACCAGGTCTTTCTTAGCTGCCTACACGGCAGTGAACTTGACGAACGCCGTCCAGAAGTCACCACCCGGCTTT
CTTAGCTGCCTACACGGCAGTGAACACCGCGCTCGACTACTACAACGTCCGGCTGATTTTCTTAGCTGCCTA
CACGGCAGTGAACTAGCTCCGAAAACCTATAACCATTTGAAGGAAAAAGAAATACCGAGTTTTTCCCGCCAG
AAACCCTCTTTTTTCGAGGTCTCGTAA
Translation:
MAEVGSSFLAAYTAVNWIHVSGIVLGNFLAAYTAVNQVDADIKPAVNFLAAYTAVNESRRERGRKLLFLAAY
TAVNWRRPNPGCSRIFLAAYTAVNNRAQQLCIVTFFLAAYTAVNRLDAAVDERLVFLAAYTAVNLSSGCAGP
VSFFLAAYTAVNAFGGDLSVVCLFLAAYTAVNNRARDTSHPRTFLAAYTAVNNRTAHLDQPRIFLAAYTAVN
VNPAPGLRIVHFLAAYTAVNHAARLEHRPGFFLAAYTAVNYYDDALQADIHFLAAYTAVNTTRPESRFAPTF
LAAYTAVNALTPHSAICFVFLAAYTAVNRALAPDRRIGCFLAAYTAVNPGWMDSKGARLFLAAYTAVNDQIL
PQYWQDRFLAAYTAVNVAATVSAKTRSFLAAYTAVNLTNAVQKSPPGFLSCLHGSEHRARLLQRPADFLSCL
HGSELAPKTYNHLKEKEIPSFSRQKPSFFEVS*
AnnotationID:5999GeneID:5998
AnnotatorUID: danlee
Modification Date/Time: 2005-09-28 17:05:32
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
no significant homologies
Structural Features:
Genomic Context:
Comment:
ReferenceID:15850
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29117
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49000How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2018019Stop: 2016625
Length: 1395
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCCGAGGTGGGTTCGAGTTTCTTAGCTGCCTACACGGCAGTGAACTGGATTCATGTATCAGGCATCGTA
CTCGGCAATTTCTTAGCTGCCTACACGGCAGTGAACCAGGTAGACGCGGACATCAAGCCCGCCGTGAATTTC
TTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTAC
ACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAAC
AACCGCGCGCAACAGCTGTGCATCGTCACCTTTTTCTTAGCTGCCTACACGGCAGTGAACCGTCTCGATGCT
GCCGTCGATGAGCGTCTTGTTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCT
GTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTC
TTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGCGCACTTTCTTAGCTGCCTAC
ACGGCAGTGAACAACAGAACCGCGCACCTCGATCAGCCTCGCATTTTCTTAGCTGCCTACACGGCAGTGAAC
GTAAATCCAGCGCCTGGGCTGCGCATTGTCCATTTCTTAGCTGCCTACACGGCAGTGAACCACGCAGCCAGG
CTCGAACATCGGCCCGGCTTTTTCTTAGCTGCCTACACGGCAGTGAACTACTACGACGACGCTTTGCAGGCT
GATATTCATTTCTTAGCTGCCTACACGGCAGTGAACACGACGCGACCAGAATCGCGATTTGCACCCACTTTC
TTAGCTGCCTACACGGCAGTGAACGCGCTGACGCCGCATTCGGCGATCTGCTTCGTTTTCTTAGCTGCCTAC
ACGGCAGTGAACCGGGCGCTTGCGCCGGATCGGCGAATTGGATGTTTCTTAGCTGCCTACACGGCAGTGAAC
CCGGGCTGGATGGACTCGAAGGGCGCCAGGCTTTTCTTAGCTGCCTACACGGCAGTGAACGACCAGATCCTG
CCGCAGTACTGGCAGGACCGTTTCTTAGCTGCCTACACGGCAGTGAACGTCGCAGCCACTGTGTCGGCCAAA
ACCAGGTCTTTCTTAGCTGCCTACACGGCAGTGAACTTGACGAACGCCGTCCAGAAGTCACCACCCGGCTTT
CTTAGCTGCCTACACGGCAGTGAACACCGCGCTCGACTACTACAACGTCCGGCTGATTTTCTTAGCTGCCTA
CACGGCAGTGAACTAGCTCCGAAAACCTATAACCATTTGAAGGAAAAAGAAATACCGAGTTTTTCCCGCCAG
AAACCCTCTTTTTTCGAGGTCTCGTAA