ViewGene

Locus Name:
GeneID:
Location:

GeneID:5852
TrivialName: PA14_38920
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_38920
PAO1 Ortholog Locus:
Sequence Length:177
Protein Length:58
Start: 3469164
Stop: 3468988
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTCTCGACAACGACAATGGACAGGAGTCGCCGCCATGCGCATCGCCGTCACCCTGGTGTTGCCCATCCTG
CTGATCCTCAGCCTGCTCGGGTTCGATTTCCTCTATTCCCGCCACCTCGGCCAGGAAAGACCTGCCGCCTGC
GCCGTCGGACAGGCCTGTCGGATCGCCCCCTGA
Translation:
MSRQRQWTGVAAMRIAVTLVLPILLILSLLGFDFLYSRHLGQERPAACAVGQACRIAP*
AnnotationID:5853GeneID:5852
AnnotatorUID: diggins
Modification Date/Time: 2005-03-02 16:04:21
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:11621
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28827
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48854How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1484747Stop: 1484923
Length: 177
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTCTCGACAACGACAATGGACAGGAGTCGCCGCCATGCGCATCGCCGTCACCCTGGTGTTGCCCATCCTG
CTGATCCTCAGCCTGCTCGGGTTCGATTTCCTCTATTCCCGCCACCTCGGCCAGGAAAGACCTGCCGCCTGC
GCCGTCGGACAGGCCTGTCGGATCGCCCCCTGA