ViewGene

Locus Name:
GeneID:
Location:

GeneID:5831
TrivialName: PA14_39700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_39700
PAO1 Ortholog Locus:
Sequence Length:147
Protein Length:48
Start: 3538047
Stop: 3538193
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAP85991.1| (AY305378) conserved hypothetical protein [Ralstonia eutropha]
Identities = 30/41 (73%), Positives = 34/41 (82%)
Sequence:
ATGAACCCCAACCAGTTGCCCGAAGGCCAGCGCCAGCGCTGCGAAGTCTGGACCCGCGTGATGGGCTACCAC
CGTCCCGTGGCAGCGTTCAATGCCGGCAAGCAGTCCGAGCATCGCGAACGCCGCCATTTCCGCGAGACGCGA
TGA
Translation:
MNPNQLPEGQRQRCEVWTRVMGYHRPVAAFNAGKQSEHRERRHFRETR*
AnnotationID:5832GeneID:5831
AnnotatorUID: danlee
Modification Date/Time: 2006-05-03 11:11:56
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ORF present but not annotated in PAO1.
ReferenceID:11584
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28788
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:37024
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:5831_cdd.html
URL:
GC ORFID: 48833How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1415864Stop: 1415718
Length: 147
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAACCCCAACCAGTTGCCCGAAGGCCAGCGCCAGCGCTGCGAAGTCTGGACCCGCGTGATGGGCTACCAC
CGTCCCGTGGCAGCGTTCAATGCCGGCAAGCAGTCCGAGCATCGCGAACGCCGCCATTTCCGCGAGACGCGA
TGA