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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05006.1|AE004589_9 (AE004589) probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
Identities = 552/555 (99%), Positives = 555/555 (100%)
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Sequence:
GTGGTCACTGCAAATCGTCTGCCGCTCGAAGTCTTCTTCGAGCGCGAAAAGCGTCATCCGCAACGGCGTTAC
CTGGTGCAGCCCATCGGTGGCGGCCGGGTCGAGGAGCTGAGCTGGGGCGAGGTGGGCGACCAGGCGCGGCGT
GCAGCCGCCTGGTTGCGCAGCCTGGATCTCCCCGCCGGCAGCCGTATCGCGATCATCTCGAAGAACTGTGCG
CACTGGATCGTCACTGACCTGGCGATCTGGATGGCCGGGCACGTTTCCGTCCCCCTCTATCCCAATCTCACC
GCCGAGTCGGCGCGCCAGGTGCTGGAGCATTCCGAGTCGGCGGTGGTCTTCGTCGGCAAGCTCGACGACTGG
CCGGCGATGGCGCCCGGAGTCCCCGAGGGCATACCGACCGTGGCCATGCCGTTGCACCCGGAAGGGCGTTTC
GACCGCCAGTGGAGCGACCTGCAGGCCTGCGCGCCGCTCGAAGGCGACACGCCGACCGCCGCCGAGCAACTC
GCCACCCTGATCTACACCTCTGGAACCACCGGCGTGCCCAAGGGGGTGATGCACAACTTCAGCAGTTTCGCC
TTCGCCGCCAGCCGCGGCGTGGAACTGTTCGGCACTCGCGAAGACGACCGGATGCTCTCCTACCTGCCGCTG
TGCCACGTGGCGGAGCGGATGTTCGTCGAGATGGGGTCGCTCTACGGGGGAACCACGGTGTTCTTCGCCGAA
AGCCTGGACACCTTCCTCGAGGACATGAAGCGTGCGCGGCCGACCCTGCTGTTCGGCGTGCCGCGCATCTGG
ACCAAGTTCCAGATGGGGGTGTATTCGAAGATGCCGGCGCAGAAGCTCGACCGCCTGCTGAAGCTGCCGATC
CTCGGCCGCATCGTCGGTCGCAAGGTGCTCGCCGGGCTAGGCCTGGACGCGGTGCGCTACGCGCTCTGCGGC
GCGGCGCCGGTACCCGAGGCGCTGCTGCTCTGGTATCGCCGCCTGGGCCTGGACGTGCTCGAGGTCTACGGG
ATGACCGAGAACAGCGGCTACTCCCACGTCTGCCGGCCCGGCCGGCAGAAGACCGGCTGGATCGGCCAGAAC
AGCCCCGGCGTCGAGGTACGCATCAGCGACGAGGGCGAGGTGCAGGTGCGTAGCGGCGCAACCATGGTCGGC
TACTACAAGGAGCCGGAGAAGACCGCCGAGGTGCTCACCTCCGACGGTTTCCTGCGCACCGGCGACAAGGGC
GAGCAGGACGCCGACGGCAACCTGCGCCTGACCGGGCGGATGAAGGAAATCTTCAAGACCAGCAAGGGCAAG
TACGTGGCGCCGGCGCCGATCGAGAATCGCCTGGCGGTGCACGATCGCATCGAGCAGGTCTGCGTGGTCGGC
GAGGGCCTCAGCGCGCCGCTGGGGCTCTGCGTGCTCTCCGAGGTCGGTCGCCGGGAGGCCCTCAACGGTACC
CGCGGGGCGCTGGAAAGCAGCCTGCGGGCGCACCTGGAACAGGTCAACGGTGCGCTCGACAAGCACGAGCGC
CTGGTCGGCCTGGTTCTGGTGCAGGAAACCTGGGCGGTGGACAACGGTTTCCTCACGCCGACCTTGAAGATC
AAGCGCAATATGGTGGAAGGTGCCTATGGCTCGCGCTTCCACGAATGGGTGGAACGCCGCGAGGCCGTGCTC
TGGCACGAATGA |
Translation:
MVTANRLPLEVFFEREKRHPQRRYLVQPIGGGRVEELSWGEVGDQARRAAAWLRSLDLPAGSRIAIISKNCA
HWIVTDLAIWMAGHVSVPLYPNLTAESARQVLEHSESAVVFVGKLDDWPAMAPGVPEGIPTVAMPLHPEGRF
DRQWSDLQACAPLEGDTPTAAEQLATLIYTSGTTGVPKGVMHNFSSFAFAASRGVELFGTREDDRMLSYLPL
CHVAERMFVEMGSLYGGTTVFFAESLDTFLEDMKRARPTLLFGVPRIWTKFQMGVYSKMPAQKLDRLLKLPI
LGRIVGRKVLAGLGLDAVRYALCGAAPVPEALLLWYRRLGLDVLEVYGMTENSGYSHVCRPGRQKTGWIGQN
SPGVEVRISDEGEVQVRSGATMVGYYKEPEKTAEVLTSDGFLRTGDKGEQDADGNLRLTGRMKEIFKTSKGK
YVAPAPIENRLAVHDRIEQVCVVGEGLSAPLGLCVLSEVGRREALNGTRGALESSLRAHLEQVNGALDKHER
LVGLVLVQETWAVDNGFLTPTLKIKRNMVEGAYGSRFHEWVERREAVLWHE* |
AnnotationID:589 | GeneID:580 |
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Modification Date/Time: |
2005-05-18 12:12:07 |
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GeneProduct: | putative AMP-binding protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | putative long-chain acyl-CoA synthetases (AMP-forming) |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | secondary metabolites, biosynthesis, transport, and catabolism |
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Homology: | >gb|AAF95484.1| (AE004304) long-chain-fatty-acid--CoA ligase, putative [Vibrio
cholerae]
Length = 563
Score = 424 bits (1090), Expect = e-118
Identities = 222/552 (40%), Positives = 334/552 (60%), Gaps = 11/552 (1%)
>gb|AAN53440.1|AE015483_6 (AE015483) AMP-binding protein [Shewanella oneidensis MR-1]
Length = 554
Score = 423 bits (1087), Expect = e-117
Identities = 223/542 (41%), Positives = 327/542 (60%), Gaps = 8/542 (1%)
>dbj|BAC60688.1| (AP005081) putative long-chain-fatty-acid-CoA ligase [Vibrio
parahaemolyticus]
Length = 568
Score = 413 bits (1062), Expect = e-114
Identities = 221/553 (39%), Positives = 331/553 (59%), Gaps = 13/553 (2%) |
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Structural Features: | COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming)
[Lipid metabolism]
CD-Length = 613 residues, 98.4% aligned
Score = 517 bits (1332), Expect = 2e-147
Identities = 213/605 (35%), Positives = 292/605 (48%), Gaps = 56/605 (9%)
pfam00501, AMP-binding, AMP-binding enzyme.
CD-Length = 412 residues, 100.0% aligned
Score = 269 bits (689), Expect = 6e-73
Identities = 133/438 (30%), Positives = 187/438 (42%), Gaps = 47/438 (10%)
COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
CD-Length = 534 residues, 84.5% aligned
Score = 245 bits (627), Expect = 7e-66
Identities = 142/479 (29%), Positives = 206/479 (43%), Gaps = 51/479 (10%) |
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