ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5685

TrivialName: PA14_46510

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_46510

PAO1 Ortholog Locus:

Sequence Length: 1359

Protein Length: 452

Start: 4140104

Stop: 4138746

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC68832.1| (AP005025) hypothetical protein [Streptomyces avermitilis MA-4680] Identities = 89/349 (25%), Positives = 131/349 (37%), Gaps = 52/349 (14%) Peptide ETSPPAGAAPTLTAK verified by Mass Spectrometry.

Sequence:

GTGATCTCCTACGGTCTAAGGCTTGGGGCCGTCAACGCGGGGTACGACGGGCTGGATCCTCTGGGCAACTAC
GTCGCCAAGCACATCGGGCGAGGGTCGGCAGGTGTCATCCGGTTGCTGCCTTCAGCACTATCCACAGTGCCG
CAGGCTGTTGCGCAAGGGCAGCCCGTGACCCCGCTACGTCTGCATCAGGCGCTGGCACAGGTTCTTGGCAAC
ACCACGCAGCTTCCGGTGCAGAACATCGGGCTGTTGTTCGCACATAGCTATCAGCCGGCCCCGCGCATTTTC
GGACTCATGTTTGACCTGGGCTTCCGCACCCCCGAGGATCAGGCCGTCGACATGTTCACGCAGGTTCCGCGG
CAAGGCTGCGTCGTATTCCTTGGGGCCATCGCGGCGGCCCGAGCCGGCGCTGAGTTTGATCGGCAAGTGGCG
TTCACTAGCGTGCATGAGGTTGGCCACGTCTTCAACCTGATCCACCAGACCTCCCCGTTGACGTTCATGGCG
AGCAGCAAGAAAGACGCCACCTATGGCGATGGCGCGTATTTTTTTGGCCCGAACCAAACGAACTGGCTGATG
AGGTGCGCCACCGACGTGGATGTGATGCCAGGCGGATCGATCTTTCGCGACTTTGGATATCAAGACAAGAGG
GCGGGAAGGGCTGCCGCCAGCGGCCAACTGGCCTTGGATGTGAGCACAAGCAGCGACGAGTTTTGGCCGATG
GAGCCGATCATGCTTAACATCCGGCTGAGCGTTACCGGGACGTCAAAAGCAGTGGTCCCTGCGGAAGTCGAT
CCTGGGTACAAACGGTTCCGGGTCATGATTCGGGATCCTGACGGAAGCGTGCGACTGTATCGGTCGCCTTTG
AGGTTTTGCTCGCAGGGAGCATCCATCGAGATATCTGCCGAAAGTCCATTCGTCCGAGATCTGCCGCTCTTC
GGGCAAGCAGGCGGCTATACATTCAAGGCTGCCGGTCTTCATCAGGTGTGGGCAGAGTTGGACGTCACGGGC
CGCAAGCTGCTTCGCTCCAACGTATGCGAGATCAACGTCCTCCCGGAGTTTCGTCGGCGGCCCAAGTGGGCT
GAGATTGCCTCCCCCAGCAACGCGCGGACGCTGTTCTACCGAGCCGGTGGGATCGACGAGTTTTCATCGATC
TTGCACTCTGCAAGATTGGCCCGACCGATGACTCGGGCCATGGCGCTGTATGTCTGCTCAAGGGCGGCGTTG
TCGGCGGGCTGCATAGATCGGCGGCGGAATGAGTGGGCCCGCGAACATTTGCAGCGGTGCCTGGATCTGGCG
GTACTTCCTCCCCATCAACAATCGCGAGCGGAACAGTCATTGGCACTGATATCTTCAGCCTGA

Translation:

MISYGLRLGAVNAGYDGLDPLGNYVAKHIGRGSAGVIRLLPSALSTVPQAVAQGQPVTPLRLHQALAQVLGN
TTQLPVQNIGLLFAHSYQPAPRIFGLMFDLGFRTPEDQAVDMFTQVPRQGCVVFLGAIAAARAGAEFDRQVA
FTSVHEVGHVFNLIHQTSPLTFMASSKKDATYGDGAYFFGPNQTNWLMRCATDVDVMPGGSIFRDFGYQDKR
AGRAAASGQLALDVSTSSDEFWPMEPIMLNIRLSVTGTSKAVVPAEVDPGYKRFRVMIRDPDGSVRLYRSPL
RFCSQGASIEISAESPFVRDLPLFGQAGGYTFKAAGLHQVWAELDVTGRKLLRSNVCEINVLPEFRRRPKWA
EIASPSNARTLFYRAGGIDEFSSILHSARLARPMTRAMALYVCSRAALSAGCIDRRRNEWAREHLQRCLDLA
VLPPHQQSRAEQSLALISSA*

AnnotationID:5687 GeneID:5685

AnnotatorUID: diggins

Modification Date/Time: 2005-02-23 20:08:39

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15551

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28502