ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5684

TrivialName: PA14_46520

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_46520

PAO1 Ortholog Locus:

Sequence Length: 1140

Protein Length: 379

Start: 4141240

Stop: 4140101

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAO35096.1| (AE015937) putative S-layer protein [Clostridium tetani E88] Identities = 55/144 (38%), Positives = 68/144 (47%), Gaps = 21/144 (14%)

Sequence:

ATGAAACGGCACACAACCTTGGCCCGCTATTTCGGGTGTGCCCTGCTGACGCTCAGTGTCCAAGGATGCGTG
ACCTGGGTTGATGTGGAGAAATTCAAGCAACCTGCGCCTGACCCCAGGACTCCCAGCGAAGTGCCATCATCG
AGCCAGAAGGGGTTTCGGTACTCGATGCCGGAGCCCTACCTGTTGGTCAAGCCCAAGGCCGATGGCACTGCA
ACCTACGAGTGGGTCTTCCTGCCTGACCGGAACAACGAGTACGTGGTAGCACCCAAGTCCCTCTTTGCCACC
TACAAGATGACGGTCGCGACCGAGAACGGCTTTCTAACGTCCGCCAGCTTTGATGGCACGGCGAACGAGGTG
GCGAGCAAGCTGGCTAGCGTCGTTGGCGACGTGAATGCAGCAAACAAGACATCGGAGTCGGCTGCCCAGAAG
GCCATTGAGCAAGCAGCCCAGACCAAGGCAGCAGCGGATGAGACGGCTTTCAACACCAAGCTGGCGGCTGCG
CAAAAGGCAGTGGCCGATGCGGAGGCTACACAAACAAGTGCCGAGGCCGAACTTAAGTTTTACGAGTCGGAC
GCTGGCAAGGGCGCAAAGGACGAGGTGAAGCTGGCGGCCCAGCTCGCGAAGCAGAAAGCGGACGCAACGCTC
GCTTTGATGAACAAACGCCTCCAGGACTTGCTTGTCAGCAGCAGTGGCGCAAAGGACGCCGGCGCTGCCGAG
CCAGGCATTAAGCACGCCATGGGGCCGGTACTGTTCAAGCTCGTGCAGACGGCGAACTCGGTCTCCCTAGTG
CAGGTCGACATCCAGCGCACCTTCGAGACTTCCGGCACGCCGGCCAAGGAGACTTCACCACCCGCTGGAGCA
GCGCCTACGCTCACCGCGAAGAATGTGAGCAATACCGCAGGAACAACGGTTGTCGACTTCTCGGCATCGGCC
GCAATCGAGATCGTCAACGACGCTTTGCTAACTTTAAACAAGGGGAATGTCGCCTACGACAAGTCCAAGGTT
GTCTACAAGAAGGGAGCCGGGGACAAACAGTACCAGGCCACCTTCAAGCCCACGCTGCCTGCGGGCAAATAC
ACGCTGCTGGTCGTGTACGACAAGGACAAGTCGGCGCAGCTGGAGTTCACCGTCAAGTGA

Translation:

MKRHTTLARYFGCALLTLSVQGCVTWVDVEKFKQPAPDPRTPSEVPSSSQKGFRYSMPEPYLLVKPKADGTA
TYEWVFLPDRNNEYVVAPKSLFATYKMTVATENGFLTSASFDGTANEVASKLASVVGDVNAANKTSESAAQK
AIEQAAQTKAAADETAFNTKLAAAQKAVADAEATQTSAEAELKFYESDAGKGAKDEVKLAAQLAKQKADATL
ALMNKRLQDLLVSSSGAKDAGAAEPGIKHAMGPVLFKLVQTANSVSLVQVDIQRTFETSGTPAKETSPPAGA
APTLTAKNVSNTAGTTVVDFSASAAIEIVNDALLTLNKGNVAYDKSKVVYKKGAGDKQYQATFKPTLPAGKY
TLLVVYDKDKSAQLEFTVK*

AnnotationID:5686 GeneID:5684

AnnotatorUID: danlee

Modification Date/Time: 2005-09-28 13:01:55

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Amino acids 121-374 align with amino acids 119-376 of: 
>emb|CAD05209.1| (AL627268) tolA protein [Salmonella enterica subsp. enterica serovar Typhi]
Length = 376 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 86/285 (30%), Positives = 117/285.

Genomic Context:

Comment:

ReferenceID:11319

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28500