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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07112.1|AE004791_9 (AE004791) single-stranded-DNA-specific exonuclease RecJ [Pseudomonas aeruginosa PAO1]
Identities = 570/571 (99%), Positives = 571/571 (100%)
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Sequence:
ATGCGTATCGAACCCCGCCCCCTGCCCGAAACCCTGCCCGATCTCGGCGACCTTCCGCCATTGCTGGCACGC
CTGTACGCAGCTCGTGGCGTGCGTTGCGCCGAGGAGCTGGACAAGGGCCTGGCGCGGCTGATTCCCTTCCAG
CGGCTGAAAGGCATCGAGGAGGGCGTGGCGCTGCTGGTGGATGCCCTGGAGGGCGGCCAGCGGATTCTCATC
GTCGGCGACTTCGACGCCGACGGCGCCACCGCCAGCAGCGTCGGCGTGCTGGCCCTGCGCATGCTCGGCGCG
GCCTGGGTCGATTACCTGGTGCCGAACCGCTTCGAGTACGGCTACGGCCTGACCCCGGAGATCGTCGGCGTG
GCCCTGGAGAAGCGTCCCGACCTGCTGGTGACGGTGGACAACGGTATCTCCAGCGTGGACGGCGTCCAGGCG
GCGAAAGCCGCGGGGCTCAAGGTGCTGGTCACCGACCACCACCTGCCTGGCCCGGAACTGCCGGCGGCGGAT
GCGATCATCAACCCCAACCAGCCGGGCTGCGAATTCCCCAGCAAGGCCATGGCCGGGGTCGGGGTGATCTTC
TATGTGATGCTGGCGTTGCGGGCGCGCCTGCGCGAGCTGGACTGGTTCGCCCGGCGCGGGCTGAAGGAACCG
AACCTCGCCGAGCTGCTCGACCTGGTGGCGCTGGGCAGCGTCGCCGATGTGGTGCCGCTCGATGCCAACAAC
CGCATCCTGGTCCACCAGGGCCTCGCGCGCATCCGCGCCGGCCGCGCCCGGCCGGGCTTGCGCGCGCTGCTG
GAGGTGGCCGGGCGGCCTCCGGTACGGATCACCTCCACCGACCTGGGTTTCATCCTCGGTCCGCGCCTGAAC
GCGGCGGGTCGGCTCGACGACATGTCTCTCGGCATCGAATGCCTGCTCTGCGACGACGAAGCGCTGGCCCGC
GACATGGCGGTGCAGCTCGACCAGTTGAACCAGGACCGCAAGGCCATCGAGCAGGGTATGCAGCGCGAGGCG
CTGGCGCAGCTCAAGGAGCTGAGCCTGGAGCAACTGCCGTTCGGCTTGTGCCTGTTCGACGCCGACTGGCAC
CAGGGCGTGATCGGAATCCTCGCCTCGCGCCTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGAC
GCCGGCGACGGCAGCCTGAAAGGCTCGGCACGGTCGATTCCCGGCTTCCACATCCGCGACGCGCTGGACGCG
GTAGCCGCCCGTCATCCCGGGCTGATCAGCAAGTTCGGCGGCCACGCGATGGCTGCCGGACTATCGTTGCCG
CAGGAAAACTTCGGCGCTTTCTCCGCCGCCTTCGATGCCGAAGTACGCCGCCAACTGGCCGAGGAGGACCTG
GCCGGGCGCCTGCTCTCCGATGGCCAGTTGAGCATCCAGGAGTTCCACCTGGAGCTGGCGCGCGCGTTGCGC
CAGGCAGGTCCCTGGGGCCAGCACTTTCCCGAGCCGATGTTCCACGGGGTGTTCCAGCTGGTGCAGCAGCGG
ATCGTCGGCGAGCGTCACCTGAAGCTGGTGCTGAAAAGCGAATGCGGCTCGCTGCAACTGGATGGCATTGCC
TTCAACATCGACCGCGAGCAGTGGCCCAACCCTACCGTGCGCTGGGCCGAGCTGGCCTACAAGCTCGACGTC
AACGAATTCCGCGGCCAGGAAAGCGTGCAACTGATGATCGTCCACATGGCCCCTCGCTGA |
Translation:
MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPFQRLKGIEEGVALLVDALEGGQRILI
VGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGVALEKRPDLLVTVDNGISSVDGVQA
AKAAGLKVLVTDHHLPGPELPAADAIINPNQPGCEFPSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEP
NLAELLDLVALGSVADVVPLDANNRILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLN
AAGRLDDMSLGIECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKFGGHAMAAGLSLP
QENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALRQAGPWGQHFPEPMFHGVFQLVQQR
IVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPTVRWAELAYKLDVNEFRGQESVQLMIVHMAPR* |
AnnotationID:575 | GeneID:566 |
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Modification Date/Time: |
2005-04-22 08:08:27 |
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GeneProduct: | single-stranded-DNA-specific exonuclease RecJ |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO55009.1| (AE016861) single-stranded-DNA-specific exonuclease RecJ
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 569
Score = 944 bits (2440), Expect = 0.0
Identities = 466/571 (81%), Positives = 518/571 (90%), Gaps = 2/571 (0%)
>gb|AAN81920.1|AE016766_8 (AE016766) Single-stranded-DNA-specific exonuclease recJ
[Escherichia coli CFT073]
Length = 577
Score = 661 bits (1706), Expect = 0.0
Identities = 335/572 (58%), Positives = 432/572 (75%), Gaps = 2/572 (0%)
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Structural Features: | COG0608, RecJ, Single-stranded DNA-specific exonuclease
[DNA replication, recombination, and repair]
CD-Length = 491 residues, 97.4% aligned
Score = 409 bits (1051), Expect = 1e-114
Identities = 218/508 (42%), Positives = 301/508 (59%), Gaps = 32/508 (6%) |
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