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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07097.1|AE004790_2 (AE004790) probable GMC-type oxidoreductase [Pseudomonas aeruginosa PAO1]
Identities = 555/557 (99%), Positives = 555/557 (99%)
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Sequence:
ATGCCCGAGGTACTGGATACCTACGACTACCTCATCGTCGGCGCCGGACCTGCCGGCTGCCTGCTGGCCAAC
CGGCTTTCCGCCGACCCTGCCAACCGTGTCCTGCTGCTGGAAGCCGGCGGTCCGGACAACTATCCCTGGATC
CACATTCCCGTCGGCTACCTCTACTGCATCGGCAACCCGCGTACCGACTGGTGCTTCGACACCGACGAGGTC
CCCGGGCTCAACGGTCGTTCCCTGAAGTACCCGCGCGGCAAGGTGCTCGGAGGATGCTCCTCGATCAATGGC
ATGATCTACATGCGTGGCCAGGCCCGCGACTACGACCAGTGGGTGGCCGAAGGCAATCCGGGCTGGAGCTGG
AGAGAGCTGCTGCCGCTGTTCCGCAGGATGGAGGACCATTTCGCCGGGACCAGCGAAATGCACGGCGCCGGC
GGCGAATGGCGGGTAGAACGCCAGCGGCTCTCCTGGAAGCTGCTCGATGCCTTCCAGCAGGCGGCGGCGCAG
ACCGGAATCGCCAGCGTCGAGGATTTCAACGGTGGCGACAACGAAGGCTGCGGCTACTTCCAGGTCAACCAG
CGCGGCGGGGTGCGCTGGAATGCCTCGAAAGGCTTCCTGCGCGGCATCGCCCAGCGCGCCAACCTGACGGTT
CTGACCCATGCCGAAGTCCAGCGGGTGCTCCTCGAGGACGGCCGCGCCAGGGCCCTGTCGGTCCGTTGGCAG
GGCCGCGAGCAGCGCTTCGAGGCGCGCCGCGAGATCGTCCTGAGCGCTGGCGCGATCGGTTCGCCGTGCCTG
CTGCAACGCTCCGGGATCGGCCCGCGGGACCTGCTGGAGCGGCTCGGTGCCGGGGTCGTCCACGAGTTGCCC
GGGGTCGGCGGTAACCTCCAGGATCACCTGCAACTGCGCATGATCTACAAGGTCGACGGCGTTCCCACCCTC
AACCAGATCGCCGGCAGCCTATGGGGCAAGCTGGGCATGGGCCTGCGCTACCTGGCGAGCCGCAGCGGGCCG
TTGTCGATGGCGCCGAGCCAACTGGGCGCCTTCGCCCGCTCCGATCCGCAGCAGCCCTCGGCCAACCTCGAA
TACCACGTCCAGCCGCTCTCGCTGGATCGCTTCGGCGAGCCGCTGCATGCCTTCCCGGCGTTCACCGCGTCG
GTCTGCGACCTGCGTCCGCACAGCCGGGGAACGGTGCGCATCCGCTCGCTCGACCCGGGCGAGGCGCCGTCG
ATCCAGCCCAACTACCTGAGCGATCCGCGCGACCTGAAGGTCGCTGCCGACGCCATACGCCTGACCCGCCGC
ATCGCCGCCGCGCCGGCGCTGGCCGCCTTCCGTCCGCAGGAGTACAAGCCCGGCCCGGAATACCGCAGCGAA
GAGGATCTGCAGCGCGCCGCGGCGGAGATCGGCACCACCATCTTCCACCCTGCCGGCACCTGCCGCATGGGC
CAGGGGCCGCAAGCGGTGGTGGATGCGCAATTGAGGGTGCACGGAATCCCCGGCCTGCGTATCGCCGATGCC
TCGATCATGCCCAGCCTGACCTCCGGCAACACCTGTTCGCCGGTGCTGGTGATCGCCGAGAAGGCGGCGCAG
ATGATTCTCGCCGAGCGCCGCCGCGAGGCCGCGCCGCAGGTCGTCGAAAGCGCCATGGCTACCGGCGGCAAG
GAGGCGGTGGAGGCCTGA |
Translation:
MPEVLDTYDYLIVGAGPAGCLLANRLSADPANRVLLLEAGGPDNYPWIHIPVGYLYCIGNPRTDWCFDTDEV
PGLNGRSLKYPRGKVLGGCSSINGMIYMRGQARDYDQWVAEGNPGWSWRELLPLFRRMEDHFAGTSEMHGAG
GEWRVERQRLSWKLLDAFQQAAAQTGIASVEDFNGGDNEGCGYFQVNQRGGVRWNASKGFLRGIAQRANLTV
LTHAEVQRVLLEDGRARALSVRWQGREQRFEARREIVLSAGAIGSPCLLQRSGIGPRDLLERLGAGVVHELP
GVGGNLQDHLQLRMIYKVDGVPTLNQIAGSLWGKLGMGLRYLASRSGPLSMAPSQLGAFARSDPQQPSANLE
YHVQPLSLDRFGEPLHAFPAFTASVCDLRPHSRGTVRIRSLDPGEAPSIQPNYLSDPRDLKVAADAIRLTRR
IAAAPALAAFRPQEYKPGPEYRSEEDLQRAAAEIGTTIFHPAGTCRMGQGPQAVVDAQLRVHGIPGLRIADA
SIMPSLTSGNTCSPVLVIAEKAAQMILAERRREAAPQVVESAMATGGKEAVEA* |
AnnotationID:574 | GeneID:565 |
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Modification Date/Time: |
2006-04-07 14:02:13 |
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GeneProduct: | putative glucose-methanol-choline oxidoreductase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | carbon compound metabolism |
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Pathway: | Betaine biosynthesis from choline; first step. |
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Homology: | >gb|AAN65690.1|AE016196_1 (AE016774) oxidoreductase, GMC family [Pseudomonas putida KT2440]
Length = 550
Score = 816 bits (2107), Expect = 0.0
Identities = 391/531 (73%), Positives = 440/531 (82%)
>emb|CAC47556.1| (AL591792) PUTATIVE ALCOHOL DEHYDROGENASE PROTEIN [Sinorhizobium
meliloti]
Length = 531
Score = 710 bits (1833), Expect = 0.0
Identities = 340/531 (64%), Positives = 411/531 (77%)
>gb|AAN34129.1|AE014589_6 (AE014589) oxidoreductase, GMC family [Brucella suis 1330]
Length = 532
Score = 689 bits (1777), Expect = 0.0
Identities = 331/530 (62%), Positives = 406/530 (76%) |
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Structural Features: | COG2303, BetA, Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]
CD-Length = 542 residues, 99.3% aligned
Score = 511 bits (1317), Expect = 2e-145
Identities = 243/544 (44%), Positives = 308/544 (56%), Gaps = 15/544 (2%)
KOG1238, Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase
CD-Length = 542 residues, 99.3% aligned
Score = 511 bits (1317), Expect = 2e-145
Identities = 215/577 (37%), Positives = 292/577 (50%), Gaps = 44/577 (7%)
pfam00732, GMC_oxred_N, GMC oxidoreductase.
CD-Length = 291 residues, 100.0% aligned
Score = 286 bits (734), Expect = 8e-78
Identities = 131/291 (45%), Positives = 176/291 (60%), Gaps = 7/291 (2%) |
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