ViewGene

Locus Name:
GeneID:
Location:

GeneID:5629
TrivialName: PA14_48960
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_48960
PAO1 Ortholog Locus:
Sequence Length:93
Protein Length:30
Start: 4351468
Stop: 4351376
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04110.1|AE004507_9 (AE004507) hypothetical protein of bacteriophage Pf1 [Pseudomonas aeruginosa PAO1]
Identities = 30/30 (100%), Positives = 30/30 (100%)
Sequence:
ATGCTCCGCTATCTCTCGCTGTTCGCGGTAGGTCTGGCCACCGGCTACGCCTGGGGCTGGATCGACGGCCTA
GCGGCCTCCCTGGCTGTTTGA
Translation:
MLRYLSLFAVGLATGYAWGWIDGLAASLAV*
AnnotationID:5631GeneID:5629
AnnotatorUID: danlee
Modification Date/Time: 2006-04-12 17:05:50
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein of bacteriophage Pf1
Cell Localization:()
Synonyms:PA0721
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(22) Related to phage, transposon, or plasmid
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
PA0721 [gene=PA0721] [prot=hypothetical protein of bacteriophage Pf1]
          [comment=PA0721]
          Length = 30

 Score = 64.3 bits (155), Expect = 2e-012
 Identities = 30/30 (100%), Positives = 30/30 (100%)
Structural Features:
Genomic Context:
Cluster of genes from bacteriophage Pf1
Comment:
ReferenceID:11219
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28391
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48631How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 602440Stop: 602532
Length: 93
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTCCGCTATCTCTCGCTGTTCGCGGTAGGTCTGGCCACCGGCTACGCCTGGGGCTGGATCGACGGCCTA
GCGGCCTCCCTGGCTGTTTGA