ViewGene

Locus Name:
GeneID:
Location:

GeneID:5628
TrivialName: PA14_49010
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49010
PAO1 Ortholog Locus:
Sequence Length:216
Protein Length:71
Start: 4353159
Stop: 4352944
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGAAGTGGAAGAAATCAAGGCTCAAGACCTCCGCGCGGCGCCCCCGGTGTTGCCCTGGCGGGACTTCGCG
AACTGGATTGGCATGGGGGAAGAGCATGAAACCGTCCGTGGATGGATTCGTAAGGGCTATATCCCCGCGTAC
AAGATCGGCAAGCACGTGATGGTCAATGTTGCGCTTTTCGTCCACCAGCTGATGGAAAGGGAGGAGTTCTGA
Translation:
MEVEEIKAQDLRAAPPVLPWRDFANWIGMGEEHETVRGWIRKGYIPAYKIGKHVMVNVALFVHQLMEREEF*
AnnotationID:5630GeneID:5628
AnnotatorUID: danlee
Modification Date/Time: 2005-10-03 14:02:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:4
MolecularFunction:
Functional Category:(22) Related to phage, transposon, or plasmid
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|37596403|gb|AAQ94678.1|  hypothetical protein [Pseudomonas phage Pf1]
     Length=71
     Score =  152 bits (384),  Expect = 3e-36
     Identities = 71/71 (100%), Positives = 71/71 (100%), Gaps = 0/71 (0%)
Structural Features:
Genomic Context:
Cluster of genes with homology to Pf1
Comment:
ReferenceID:11217
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28390
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48630How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 600749Stop: 600964
Length: 216
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGAAGTGGAAGAAATCAAGGCTCAAGACCTCCGCGCGGCGCCCCCGGTGTTGCCCTGGCGGGACTTCGCG
AACTGGATTGGCATGGGGGAAGAGCATGAAACCGTCCGTGGATGGATTCGTAAGGGCTATATCCCCGCGTAC
AAGATCGGCAAGCACGTGATGGTCAATGTTGCGCTTTTCGTCCACCAGCTGATGGAAAGGGAGGAGTTCTGA