ViewGene

Locus Name:
GeneID:
Location:

GeneID:5609
TrivialName: PA14_49990
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49990
PAO1 Ortholog Locus:
Sequence Length:192
Protein Length:63
Start: 4444633
Stop: 4444824
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GVSGQVYGPSR peptide detected in proteomics (PRELIMINARY result)
Sequence:
ATGGCCATCATGAAGAAAACCGTCGCGCCGAAAGCCGCCAAGCCGGCTCCCGCGGTCGAAACCCGCGAATCC
ATCGAAGCGCAGGTCGCCGCCTTCCTCCAGGCCGGCGGCGAGATCCAGAAGATCGCCAAGGGCGTCAGCGGC
CAGGTCTACGGCCCGTCGCGGCAGATCACCATCAGCAAGAAGCGCTGA
Translation:
MAIMKKTVAPKAAKPAPAVETRESIEAQVAAFLQAGGEIQKIAKGVSGQVYGPSRQITISKKR*
AnnotationID:5611GeneID:5609
AnnotatorUID: danlee
Modification Date/Time: 2006-06-02 00:12:35
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|84328586|ref|ZP_00976590.1|  hypothetical protein Paer2_01000095 [Pseudomonas aeruginosa 2192]
 gi|84322107|ref|ZP_00970452.1|  hypothetical protein PaerC_01000088 [Pseudomonas aeruginosa C3719]
Length=63

 Score = 98.2 bits (243),  Expect = 9e-20
 Identities = 63/63 (100%), Positives = 63/63 (100%), Gaps = 0/63 (0%)

gi|94415978|ref|ZP_01295810.1|  hypothetical protein PaerP_01002307 [Pseudomonas aeruginosa PA7]
Length=63

 Score = 98.2 bits (243),  Expect = 9e-20
 Identities = 62/63 (98%), Positives = 62/63 (98%), Gaps = 0/63 (0%)
Structural Features:
Genomic Context:
Comment:
ReferenceID:11184
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28354
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48611How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 509275Stop: 509084
Length: 192
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCCATCATGAAGAAAACCGTCGCGCCGAAAGCCGCCAAGCCGGCTCCCGCGGTCGAAACCCGCGAATCC
ATCGAAGCGCAGGTCGCCGCCTTCCTCCAGGCCGGCGGCGAGATCCAGAAGATCGCCAAGGGCGTCAGCGGC
CAGGTCTACGGCCCGTCGCGGCAGATCACCATCAGCAAGAAGCGCTGA