|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG06853.1|AE004767_4 (AE004767) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 570/571 (99%), Positives = 570/571 (99%)
|
Sequence:
ATGCTCCAGTCCGTTTCGCCCAAGCACGACCTGCCCCTCAAACCCGAAGGCCAAGCGGCCAAGCCAGAACGC
ACCGGCACCTGGGCGCCGTTCTCGATCCAGGCCTTCCGCATCATCTGGATCTGCAACCTGTTCGCCAACCTC
GGCACCTGGGCCCAGTCGGTGGCCGCCGCCTGGGTGGTCACCGACGCCCACGCCAGCCCGCTGATGGTGGCG
ATGATCCAGGTCGCCGCGGCGCTGCCGCTGGTGCTGCTGTCGATCCTCTCCGGGGTCATCGCCGACAACCAC
GACCGGCGCAAGATCATGCTCTGGGGACTCAGCTTCGAGATGACCGGGGCGATGTTCGCCACCCTGCTGGCC
TTCCTCGGCTACCTCGACCCGGTGCTGCTGATCATCTCCATCCTCTGGATCTCCCTCGGCGGGTCGGTGACC
ATCCCGGCCTGGCAGGCGGCGGTCAACGAGCAGGTGCCGGCGCGCATGGTCAGCGACGCGGTGCTGCTCAAC
AGCGTCAACTACAACGTCGCCCGCGCCGCCGGCCCGGCCCTCGGCGGCCTGTTGCTGAGCGCGGTGGGACCG
GCCTGGGTGTTCCTGTTCAACAGCTTCTGCTACATGGCCCTGATCTGGGCGATCTGGCAGTGGCGGCGCGAC
GTGCCCAAGCGCAGCCTGCCGCCGGAAGGCATCCTCGAAGGCGTCACCGCGGCGCTGCGCTTCACCCAGTAC
TCAACCGTCACCCGCCTGGTGATGATGCGCTCCTTCGCCTTCGGCCTCTCCGCCAGCGCGGTCTGGGCCCTG
CTGCCGCTGCTGGCGCACCGCAACCCGGACGGCGACGCGGCGATCTACGGCTACATGCTCGGCGCCCTCGGC
CTCGGCGCGATCCTCGGCAGCACCCAGGTCTCGCGCCTGCGCCAGCGGATCGGCAGCAGCCGGCTGATCAGT
CTGGCCGGCTTCACCCTGGCGCTGATCCTGCTGACCCTCGGCCTGGTAGACAACCTCTGGGTCCTGTTCCCG
GTGCTGATCCTCGGCGGCGGCTGCTGGATCGGCGCCCTCGCCACCTACAACTCGGCGGTGCAGATCCTCGTC
CCCGACTGGATCAAGGCGCGCGCCCTGGCGTTGTACCAGACCGCGCTGTACGGTGGCCTGGCGCTGGGTTCG
TTCCTCTGGGGCCATCTCGCCGAGACCATGACCGTGCACGGTGCGCTGCTGGCCGCCGGCTGCCTGCTGCTG
GCCTCGGTGATCCTGCTGTACAACTCGCGCCTGCCGGAAATGGACGCAGCCAGTATTTCCCGCGCGCCGGCG
AGCATGCCCGGGCAGCCGAGCTTCGTCTTCAACACGCGGCGGGGCATGGTGCTGGTCTCCATCGAATACCGG
ATTCCCGCCGAGCGCACCCGCGACTTCGTTCGCGCCGCCCAGCCGCTGCGCCGCCTGCGCCTGCGCAACGGC
GCGGAGCGCTGGTCGCTGTTCCGCGACGTGAGCAACCCGGAGGTCTGGCAGGAACTGTTCCTGGTGGACAAC
TGGATCCAGCACCTGCGCATGCTCGACCGCATGACCCTGGCCGACAAGATCGTCATCGACAACGTCACCGCC
CTGCATGCCGGCGACGGTCCGCCGCAGATCCGCCATTGCGTGAGCTACGAGGCCAGCAGCTACGATACGCCG
CTGGTGAAGAGCGCCACGCCGCCGGGCAACGACGAGGCGGGCGCGACGGCGGGGAGTTGA |
Translation:
MLQSVSPKHDLPLKPEGQAAKPERTGTWAPFSIQAFRIIWICNLFANLGTWAQSVAAAWVVTDAHASPLMVA
MIQVAAALPLVLLSILSGVIADNHDRRKIMLWGLSFEMTGAMFATLLAFLGYLDPVLLIISILWISLGGSVT
IPAWQAAVNEQVPARMVSDAVLLNSVNYNVARAAGPALGGLLLSAVGPAWVFLFNSFCYMALIWAIWQWRRD
VPKRSLPPEGILEGVTAALRFTQYSTVTRLVMMRSFAFGLSASAVWALLPLLAHRNPDGDAAIYGYMLGALG
LGAILGSTQVSRLRQRIGSSRLISLAGFTLALILLTLGLVDNLWVLFPVLILGGGCWIGALATYNSAVQILV
PDWIKARALALYQTALYGGLALGSFLWGHLAETMTVHGALLAAGCLLLASVILLYNSRLPEMDAASISRAPA
SMPGQPSFVFNTRRGMVLVSIEYRIPAERTRDFVRAAQPLRRLRLRNGAERWSLFRDVSNPEVWQELFLVDN
WIQHLRMLDRMTLADKIVIDNVTALHAGDGPPQIRHCVSYEASSYDTPLVKSATPPGNDEAGATAGS* |
AnnotationID:568 | GeneID:559 |
|
Modification Date/Time: |
2005-04-19 09:09:03 |
|
|
|
GeneProduct: | putative transmembrane protein |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (27) Transport of small molecules |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >emb|CAE36883.1| (BX640427) putative membrane protein [Bordetella parapertussis]
Length = 577
Score = 683 bits (1762), Expect = 0.0
Identities = 347/573 (60%), Positives = 428/573 (74%), Gaps = 4/573 (0%)
>emb|CAC41672.1| (AL591783) PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
Length = 551
Score = 368 bits (945), Expect = e-101
Identities = 199/521 (38%), Positives = 298/521 (57%), Gaps = 4/521 (0%)
>dbj|BAB49952.1| (AP003000) probable integral membrane efflux protein [Mesorhizobium
loti]
Length = 547
Score = 352 bits (904), Expect = 3e-96
Identities = 193/541 (35%), Positives = 299/541 (55%), Gaps = 3/541 (0%) |
|
Structural Features: | COG2814, AraJ, Arabinose efflux permease
[Carbohydrate transport and metabolism]
CD-Length = 394 residues, 88.6% aligned
Score = 64.1 bits (156), Expect = 4e-11
Identities = 80/361 (22%), Positives = 133/361 (36%), Gaps = 13/361 (3%)
|
|
|
|
|
|