ViewGene

Locus Name:
GeneID:
Location:

GeneID:5580
TrivialName: PA14_51950
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51950
PAO1 Ortholog Locus:
Sequence Length:195
Protein Length:64
Start: 4612499
Stop: 4612305
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCTCCCAATGTCGAACAAGGTCGTCCATTTGCATCACAAGGATGAGCAGGCAGCGCTTGAGCGTTTGAAC
CGGATTACCGGGCTGCAGTTCAGCAGTTGGCCGGAGTCGCTGGTGCCGGCGCGCAGCGTCAGCGAACCGTCG
CCTGAGAAAGTGCGGGACGAACCCCTGCTCGATCAGGTACGCCAGGGCTGA
Translation:
MLPMSNKVVHLHHKDEQAALERLNRITGLQFSSWPESLVPARSVSEPSPEKVRDEPLLDQVRQG*
AnnotationID:5582GeneID:5580
AnnotatorUID: danlee
Modification Date/Time: 2006-06-02 00:12:41
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|84322536|ref|ZP_00970621.1|  hypothetical protein Paer2_01006203 [Pseudomonas aeruginosa 2192]
 gi|84316561|ref|ZP_00965034.1|  hypothetical protein PaerC_01005689 [Pseudomonas aeruginosa C3719]
Length=61

 Score =  124 bits (310),  Expect = 1e-27
 Identities = 60/61 (98%), Positives = 60/61 (98%), Gaps = 0/61 (0%)
Structural Features:
Genomic Context:
Comment:
ReferenceID:11136
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28297
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48582How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 341408Stop: 341602
Length: 195
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTCCCAATGTCGAACAAGGTCGTCCATTTGCATCACAAGGATGAGCAGGCAGCGCTTGAGCGTTTGAAC
CGGATTACCGGGCTGCAGTTCAGCAGTTGGCCGGAGTCGCTGGTGCCGGCGCGCAGCGTCAGCGAACCGTCG
CCTGAGAAAGTGCGGGACGAACCCCTGCTCGATCAGGTACGCCAGGGCTGA