ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5557

TrivialName: PA14_53100

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53100

PAO1 Ortholog Locus:

Sequence Length: 240

Protein Length: 79

Start: 4706899

Stop: 4707138

Strand: +

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD13769.1| (AL646058) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] Identities = 34/50 (68%), Positives = 41/50 (82%)

Sequence:

TTGGCCGATAGATGTTTTTTCGGCCAACTAGACTGGCACCATCGTTCACCGTCCCTGTCAGCCGCCATGAAC
TACCTGATCTCCCTCGGCATCGGCCTGCTGGTCGGCCTGCTCTACGCCGTACTCGACTTCCGCTCGCCGGCG
CCACCCGCCATCGCCCTGGTCGGCCTGCTTGGCATGCAGCTCGGCGAACAGCTTTTCCCCCTTGGCCGCGAC
CTGCTGCAGCAGTGGCTGCACTGA

Translation:

MADRCFFGQLDWHHRSPSLSAAMNYLISLGIGLLVGLLYAVLDFRSPAPPAIALVGLLGMQLGEQLFPLGRD
LLQQWLH*

AnnotationID:5559 GeneID:5557

AnnotatorUID: danlee

Modification Date/Time: 2004-05-03 10:10:21

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs: pfam07235, COG4317

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

pfam07235, DUF1427, Protein of unknown function (DUF1427). Score: 71.8, 3e-14
COG4317, Uncharacterized protein conserved in bacterial. Score: 65.7, 2e-12
NOTE: only ~50% of these CDs align to this ORF.

Genomic Context:

Comment:

This ORF is intact in PAO1 between PA0863 and PA0864, coordinates are 944706 (Start) to 944467 (Stop).

ReferenceID:15418

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28250