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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08735.1|AE004947_5 (AE004947) Rubredoxin 2 [Pseudomonas aeruginosa PAO1]
Identities = 55/55 (100%), Positives = 55/55 (100%)
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Sequence:
ATGCGCAAGTGGCAATGCGTGGTCTGCGGCTTCATCTACGACGAAGCCCTGGGCCTGCCCGAAGAAGGCATT
CCGGCGGGAACCCGTTGGGAGGACATCCCGGCGGACTGGGTCTGCCCGGACTGCGGTGTCGGCAAGATCGAT
TTCGAGATGATCGAGATCGCCTGA |
Translation:
MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIEIA* |
AnnotationID:5444 | GeneID:5439 |
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Modification Date/Time: |
2005-03-17 06:06:45 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (5) Carbon compound catabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | energy metabolism |
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Homology: | >gb|AAO58893.1| (AE016875) rubredoxin [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 55
Score = 101 bits (251), Expect = 1e-21
Identities = 40/55 (72%), Positives = 49/55 (89%)
>gb|AAN70880.1|AE016732_5 (AE016794) rubredoxin [Pseudomonas putida KT2440]
Length = 55
Score = 100 bits (250), Expect = 2e-21
Identities = 40/54 (74%), Positives = 46/54 (85%)
>dbj|BAB33291.1| (AB049412) rubredoxin [Acinetobacter sp. M-1]
Length = 54
Score = 97.8 bits (242), Expect = 1e-20
Identities = 39/54 (72%), Positives = 47/54 (87%)
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Structural Features: | COG1773, Rubredoxin [Energy production and conversion]
CD-Length = 55 residues, 100.0% aligned
Score = 76.1 bits (187), Expect = 9e-16
Identities = 32/55 (58%), Positives = 41/55 (74%)
cd00730, rubredoxin, Rubredoxin; nonheme iron binding domains containing
a [Fe(SCys)4] center.
CD-Length = 50 residues, 100.0% aligned
Score = 70.3 bits (172), Expect = 5e-14
Identities = 31/50 (62%), Positives = 39/50 (78%)
pfam00301, Rubredoxin, Rubredoxin.
CD-Length = 49 residues, 100.0% aligned
Score = 68.0 bits (166), Expect = 2e-13
Identities = 30/49 (61%), Positives = 36/49 (73%)
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