ViewGene

Locus Name:
GeneID:
Location:

GeneID:5426
TrivialName: PA14_63770
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63770
PAO1 Ortholog Locus:PA4823
Sequence Length:210
Protein Length:69
Start: 5685128
Stop: 5684919
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08208.1|AE004895_8 (AE004895) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 68/69 (98%), Positives = 69/69 (100%)
Sequence:
ATGAACGTCGTACGCAAATGCCTGGGCGCGTCTCGCCGCGCGCTCTGTGGCCTGGCAGCACGGCTGCTGGCG
AAGGCCGCGCACCTGCTGATGGTGATCAGCGTGCGCGCATACGCCAGCGGCCGCCTGAGCCAGGTCGAAGTG
AAATACCTGCTGGACTGCTCGAGCGCGCTCAACCGTGCCTCGCTCAGGCTGGCCATGGGTCAATGA
Translation:
MNVVRKCLGASRRALCGLAARLLAKAAHLLMVISVRAYASGRLSQVEVKYLLDCSSALNRASLRLAMGQ*
AnnotationID:5431GeneID:5426
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 06:06:16
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA4823
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:10850
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:27998
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:5426

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7819 PA4823_tr translation of PA4823 69 98.55 99.99 0 331.0
196507 gb|AAG08208.1|AE004895_8 (AE004895) hypothetical protein PA4823 [Pseudomonas aeruginosa PAO1] 69 98.55 99.99 0 331.0
GC ORFID: 48428How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA4823Glimmer Score:
Start: 4948808Stop: 4948599
Length: 210
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA4823 translation of PA4823Homolog Bit Score 132.0
Other Homologs:
GC ORF Sequence
ATGAACGTCGTACGCAAATGCCTGGGCGCGTCTCGCCGCGCGCTCTGTGGCCTGGCAGCACGGCTGCTGGCG
AAGGCCGCGCACCTGCTGATGGTGATCAGCGTGCGCGCATACGCCAGCGGCCGCCTGAGCCAGGTCGAAGTG
AAATACCTGCTGGACTGCTCGAGCGCGCTCAACCGTGCCTCGCTCAGGCTGGCCATGGGTCAATGA