ViewGene

Locus Name:
GeneID:
Location:

GeneID:5362
TrivialName: PA14_19330
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_19330
PAO1 Ortholog Locus:PA3463
Sequence Length:231
Protein Length:76
Start: 1667345
Stop: 1667115
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06851.1|AE004767_2 (AE004767) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 76/76 (100%), Positives = 76/76 (100%)
Sequence:
ATGCTGATCCCCCACGACCTGCTCGAAGCCGACACCCTGAACAACCTGCTGGAAGACTTCGTCACCCGCGAA
GGCACCGACAATGGCGACGAGACCCCGCTGGACGTGCGTGTAGAACGCGCCCGGCATGCCTTGCGGCGGGGC
GAGGCGGTGATCCTGTTCGACCCGGAGAGCCAGCAGTGCCAGTTGATGTTGCGCAGCGAGGTGCCTGCGGAG
CTGTTGCGCGACTGA
Translation:
MLIPHDLLEADTLNNLLEDFVTREGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAE
LLRD*
AnnotationID:5367GeneID:5362
AnnotatorUID: diggins
Modification Date/Time: 2005-04-18 21:09:33
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA3463
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:10724
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:27871
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:5362

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7757 PA3463_tr translation of PA3463 76 99.99 99.99 0 387.0
196167 gb|AAG06851.1|AE004767_2 (AE004767) conserved hypothetical protein [Pseudomonas aeruginosa PAO1] 76 99.99 99.99 0 387.0
196168 gb|AAO55150.1| (AE016861) conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] 76 69.73 77.63 1 271.0
196169 gb|AAN67367.1|AE016362_11 (AE016780) conserved hypothetical protein [Pseudomonas putida KT2440] 76 64.47 80.26 1 258.0
GC ORFID: 48364How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3463Glimmer Score:
Start: 3286587Stop: 3286817
Length: 231
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3463 translation of PA3463Homolog Bit Score 153.0
Other Homologs: t_PA3463 (ORF: GLIMMER)
GC ORF Sequence
ATGCTGATCCCCCACGACCTGCTCGAAGCCGACACCCTGAACAACCTGCTGGAAGACTTCGTCACCCGCGAA
GGCACCGACAATGGCGACGAGACCCCGCTGGACGTGCGTGTAGAACGCGCCCGGCATGCCTTGCGGCGGGGC
GAGGCGGTGATCCTGTTCGACCCGGAGAGCCAGCAGTGCCAGTTGATGTTGCGCAGCGAGGTGCCTGCGGAG
CTGTTGCGCGACTGA