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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05193.1|AE004606_7 (AE004606) DNA-binding protein HU [Pseudomonas aeruginosa PAO1]
Identities = 90/90 (100%), Positives = 90/90 (100%)
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Sequence:
GTGAACAAGTCGGAACTGATCGATGCAATTGCCGCATCTGCTGATATCCCGAAAGCTGTTGCCGGTCGCGCA
CTGGACGCAGTGATCGAGTCCGTCACTGGCGCCCTGAAGGCTGGTGACTCCGTCGTGCTGGTTGGTTTCGGC
ACCTTCGCTGTCAAAGAGCGCGCTGCTCGCACCGGTCGCAACCCGCAAACTGGCAAGCCGATCAAGATCGCC
GCTGCCAAGATCCCGGGTTTCAAAGCCGGTAAAGCCCTGAAGGATGCTGTCAACTAA |
Translation:
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTGRNPQTGKPIKIA
AAKIPGFKAGKALKDAVN* |
AnnotationID:5289 | GeneID:5284 |
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Modification Date/Time: |
2005-03-01 17:05:51 |
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GeneProduct: | DNA-binding protein HU |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67916.1|AE016424_2 (AE016782) DNA-binding protein HU-beta [Pseudomonas putida
KT2440]
Length = 90
Score = 158 bits (400), Expect = 5e-39
Identities = 82/90 (91%), Positives = 84/90 (93%)
>gb|AAO57192.1| (AE016869) DNA-binding protein HU-beta [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 90
Score = 152 bits (383), Expect = 5e-37
Identities = 79/90 (87%), Positives = 84/90 (93%)
>gb|AAN79034.1|AE016756_217 (AE016756) DNA-binding protein HU-beta [Escherichia coli CFT073]
Length = 90
Score = 141 bits (356), Expect = 7e-34
Identities = 73/90 (81%), Positives = 78/90 (86%) |
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Structural Features: | pfam00216, Bac_DNA_binding, Bacterial DNA-binding protein.
CD-Length = 90 residues, 100.0% aligned
Score = 110 bits (278), Expect = 3e-26
Identities = 55/90 (61%), Positives = 66/90 (73%)
smart00411, BHL, bacterial (prokaryotic) histone like domain
CD-Length = 90 residues, 100.0% aligned
Score = 106 bits (267), Expect = 5e-25
Identities = 55/90 (61%), Positives = 65/90 (72%) |
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